Pairwise Alignments

Query, 369 a.a., Protein of unknown function UPF0118 (NCBI) from Rhodospirillum rubrum S1H

Subject, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (294), Expect = 4e-31
 Identities = 87/333 (26%), Positives = 168/333 (50%), Gaps = 27/333 (8%)

Query: 11  LIGILVFA-VLIFLLRSVLLPFVTGLAVAYFLDPLADRLEKWGTSRLWAVIWITLGFVLV 69
           L+ IL+F  + I+    ++ P +  + +AY L+    +L +    R  AVI +   F  +
Sbjct: 21  LVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVFTGL 80

Query: 70  MVLALLVLLPLINGQIADFVTNMPEYARALVGKGRALLDNLVDVLGPDRMSDVT--SSLE 127
           M+LA+  L+P I  Q+ + + ++P     +    +  + +L     P+R  ++     +E
Sbjct: 81  MILAVFGLVPTIWKQVGNLINDVPN----MYNGTQKFITSL-----PERYPELAHLEIVE 131

Query: 128 AAAGEATKWLGGLVNQLISGG-AALINLVSV---LVITPVIAFYMLRDWDVMVASIDRWL 183
           +  G A   + G+   ++ G  A+L++L ++   L++ P++ F++L+D   M+      L
Sbjct: 132 SVIGNAKNKVLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGIL 191

Query: 184 PRPYAPVIRAQMAEIDRTIAGFVRGQASVCLALGSFYAIGLTIGGLDLGLIVGMISGLLS 243
           PR    +      E+++ I+ ++RG+    + +G+   I   I  L   +++ +  GL  
Sbjct: 192 PRN-RKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSV 250

Query: 244 FIPYVGTITGFIVSMGLALAQFDSW-----IDTAIIAGIFVVGQMIEGNYLTPKLVGDRI 298
            IPY+G      V++ +A+     W       T +IA  + + Q ++GN L P L  + +
Sbjct: 251 LIPYIGAAA---VTVPVAIVALFQWGLTPQFYTLLIA--YGIIQALDGNVLVPVLFSEAV 305

Query: 299 GLHPVWVIFALLAGGGLFGFLGVLLAVPLAAVI 331
            LHPV +I A+L  GGL+GF GV  A+PLA ++
Sbjct: 306 NLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLV 338