Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 466 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  286 bits (732), Expect = 1e-81
 Identities = 171/433 (39%), Positives = 245/433 (56%), Gaps = 12/433 (2%)

Query: 84  TGAEALAVLERRPPSLMLLDIHLPDMDGMEILRRVRSLPLSMGVVMITSNASISLAVAAM 143
           +G   L +L R  P+++L D+ +PDMDG+E++   ++   +  V+++T++ +I  AV A+
Sbjct: 39  SGKAGLDLLGRSDPAVLLTDLRMPDMDGLELMAHAQTQDATPSVILLTAHGTIETAVTAL 98

Query: 144 QAGANDFLVKPFSRDRLMVTLRNVIDNQRLSREVETLRENLGIAAFQG-FVGSSAAMQRV 202
           + GA DFL KP  R+ L   +   ++  RL RE   LRE +     +   +G + AM+R+
Sbjct: 99  KNGAYDFLTKPVRREDLYRAVSKGLERCRLLRENRQLREEMSRTGMERTLIGETPAMRRL 158

Query: 203 YRLIEASAASTATVFITGESGSGKELAAEALHRYGPRVKGPFVALNCGAIPRELMESEVF 262
              I A AAS  TV + GESG+GKEL A ++H    R + P V+++C AIP +L+ESE+F
Sbjct: 159 KETIAAVAASDYTVLVRGESGTGKELVAASIHALSGRAQRPIVSVHCPAIPDQLLESELF 218

Query: 263 GHVRGSFTGAVSDRDGAAAQANGGTLFLDEICEMDPNLQTKLLRFLQTGMVQKVGGDRPE 322
           GHV+G+FTGA   R G    A GGT+ LDEI ++ P +QTKLLR LQ   ++ VG     
Sbjct: 219 GHVKGAFTGAERSRKGLFMSAAGGTIVLDEIGDISPGIQTKLLRVLQEHEIRPVGSSGTV 278

Query: 323 KVDVRIVCATNRDPLEEVKAGRFREDLYYRLHVIPIRLPALRDREGDVLEIADHFLASIA 382
           KVDVRI+ +TN+     +K+G FREDL+YRL+V+ I  P LRDR  D+  +ADHFL    
Sbjct: 279 KVDVRIIASTNQALEARIKSGEFREDLFYRLNVLTIHTPPLRDRADDIPLLADHFLVQTC 338

Query: 383 TEEKKSFRGFSPAVAQALLAYDWPGNVRQLINVLRNVVVLNNGPEVTLGMLPQAIADADG 442
            E + + +  SP     L   +WPGNVR+L N +R + V   GP V +  L      AD 
Sbjct: 339 REMQIAAKRLSPEAMACLCGREWPGNVRELQNFVRRLAVFCPGPTVEMAHLRLVDGPADC 398

Query: 443 EAIAGEAAEGESPALFRQQDIEPLWVVE--KRAVERAIGACGGNIPRAA---ALLRVSPS 497
                 AA    P L   +D +   V E  +R VER +    GNI  AA    L RVS  
Sbjct: 399 ------AAPVTEPTLTPYKDAKAHVVDEFTRRYVERLLERTEGNISEAARISGLERVSLQ 452

Query: 498 TLYRKKQAWEEGR 510
            + R+      GR
Sbjct: 453 KILRRLGIGGAGR 465