Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 459 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  293 bits (750), Expect = 9e-84
 Identities = 170/437 (38%), Positives = 257/437 (58%), Gaps = 8/437 (1%)

Query: 77  WTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEILRRVRSLPLSMGVVMITSNASI 136
           +T+  +      LA LE     +++ D+ +P + G E+L +V+     + V+++T+  SI
Sbjct: 29  YTVTALNDPETGLAFLEESEVDVIVTDMKMPKITGREVLEQVKKNWPHIPVLIMTAFGSI 88

Query: 137 SLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLSREVETLRENLGIA-AFQGFVGS 195
             AV  M+ GA D++ KPFS D L++++ N  +  R+ R+   LRENL         +G 
Sbjct: 89  ESAVEVMKYGAFDYITKPFSNDELLLSVHNAAELSRMHRQYRVLRENLEERYGMHQIIGK 148

Query: 196 SAAMQRVYRLIEASAASTATVFITGESGSGKELAAEALHRYGPRVKGPFVALNCGAIPRE 255
           S A++    +++ +A S +TV I+GESG+GKEL A A+H   PR KGPFV++NC A+   
Sbjct: 149 SRAIRETLGMVDRAAPSRSTVLISGESGTGKELVARAIHFSSPRNKGPFVSVNCMALNPG 208

Query: 256 LMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDEICEMDPNLQTKLLRFLQTGMVQK 315
           ++ESE+FGH +GSFTGAV+ R G   QA GGTLFLDEI E+ P LQ KLLR LQ    ++
Sbjct: 209 VLESELFGHEKGSFTGAVAMRRGRFEQAGGGTLFLDEIGELTPELQVKLLRVLQERRFER 268

Query: 316 VGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYRLHVIPIRLPALRDREGDVLEIAD 375
           VGG    +VD+RIV ATN++  EEV+ G FREDL+YRL+V+ I LP LR+R  D+  +  
Sbjct: 269 VGGTEEVEVDIRIVAATNKNLQEEVEKGNFREDLFYRLNVVHIALPPLRERREDIHLLVA 328

Query: 376 HFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQLINVLRNVVVLNNGPEVTLGMLPQ 435
           HF+  +A E   + + F+P     +  Y+WPGN+RQL NV+   +VL +G  + +  LP 
Sbjct: 329 HFVDKLARENGVTPKTFTPEALDYMTGYEWPGNIRQLQNVVERCLVLVSGDTIRVDDLPP 388

Query: 436 AIADADGEAIAGEAAEGESPALFRQQDI-EPLWVVEKRAVERAIGACGGNIPRAAALLRV 494
            + D + +    ++A    P    Q D+ + L  +E   + RA+        +AA LL +
Sbjct: 389 ELRDEESQL---KSAVDLLPV---QLDLADTLERIEAALIRRALVRADFVQVKAAELLAI 442

Query: 495 SPSTLYRKKQAWEEGRH 511
           S S L  K + +    H
Sbjct: 443 SKSLLQYKLKKYNITGH 459