Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 491 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  301 bits (772), Expect = 3e-86
 Identities = 180/481 (37%), Positives = 262/481 (54%), Gaps = 29/481 (6%)

Query: 55  ILLVEDTPVQARTYLDYLDGGPWTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEI 114
           IL+++D      +    L+   + +    +G + LA+L R  P L+ LDI +P MDG+ +
Sbjct: 5   ILIIDDEDGIRFSLRGILEDEGFEVLEAPSGEDGLALLARETPDLVFLDIWMPGMDGLAV 64

Query: 115 LRRVRSLPLSMGVVMITSNASISLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLS 174
           L ++ +    + V+MI+ + +I  AV A++ GA+DF+ KP S +++++  +  ++   L 
Sbjct: 65  LDQLHAQRPDLPVIMISGHGTIETAVNAIRKGAHDFIEKPLSLEKVLIAAQRALEYGDLR 124

Query: 175 REVETLRENLGIAAFQGFVGSSAAMQRVYRLIEASAASTATVFITGESGSGKELAAEALH 234
           RE E LR++L  A      G S  M+ +   I   A + A V ITGE+G+GKELAA A+H
Sbjct: 125 RENEALRDSLPTAHADEMNGRSPVMETLRGQIARVAPTDAWVLITGENGTGKELAARAIH 184

Query: 235 RYGPRVKGPFVALNCGAIPRELMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDEIC 294
               R   P VA+NC AIP EL+ESE+FGH +G+FTGA S + G    A+ GTLFLDEI 
Sbjct: 185 AGSRRADRPLVAVNCAAIPEELIESELFGHEKGAFTGADSAKAGKFEMAHKGTLFLDEIG 244

Query: 295 EMDPNLQTKLLRFLQTGMVQKVGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYRLH 354
           +M    Q K+LR LQ    ++VGG R  +VDVR++ ATN++  +E+ AG FREDLYYRL 
Sbjct: 245 DMSLKTQAKILRILQEQQFERVGGHRTMRVDVRVIAATNKNLEDEIAAGTFREDLYYRLR 304

Query: 355 VIPIRLPALRDREGDVLEIADHFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQLIN 414
           V P+ LP LR+REGDV  + D F   +A +       F+P   +AL  Y WPGNVR+L N
Sbjct: 305 VFPLVLPPLREREGDVPLLIDLFAQRLARDYGVRPATFAPDAQEALARYPWPGNVRELRN 364

Query: 415 VLRNVVVLNNGPEVTLGMLPQAIADADG----------EAIAGEAAEGESPALFRQQDIE 464
            +  +++L+ G EVT  MLP       G           A  G AA G   A  +  D  
Sbjct: 365 FVERMLILHAGLEVTRSMLPPEFLPRSGAGMNGSPGAATAAGGRAASGTGGATGQGGDPL 424

Query: 465 P-------------------LWVVEKRAVERAIGACGGNIPRAAALLRVSPSTLYRKKQA 505
           P                       E + +   +  CGGN+ R A  + +  S LYRK + 
Sbjct: 425 PDHLPDMAALLAPGMDLKAARAAFEAQYLAARLAECGGNVTRLAEAVGIERSHLYRKLKG 484

Query: 506 W 506
           +
Sbjct: 485 Y 485