Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 456 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  294 bits (753), Expect = 4e-84
 Identities = 171/450 (38%), Positives = 257/450 (57%), Gaps = 13/450 (2%)

Query: 55  ILLVEDTPVQARTYLDYLDGGPWTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEI 114
           +L+V+D           L    +  E    G  A+ +    P  L+L+D+ +  M G+  
Sbjct: 9   LLVVDDDTTHRGMLQTLLADWGYRTECAGDGETAVTLCRETPFDLILMDLRMGVMSGIGA 68

Query: 115 LRRVRSLPLSMGVVMITSNASISLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLS 174
           LR +R+   ++ ++++T+ +++  AV A+++GA D+L KP   + L +TL   +D+  L 
Sbjct: 69  LREIRAYNPAIPILIMTAYSNVESAVDAIRSGAYDYLTKPLDFEELRLTLERALDHAALR 128

Query: 175 REVETLRENLGIAAFQ--GFVGSSAAMQRVYRLIEASAASTATVFITGESGSGKELAAEA 232
            E   L+  L  ++F   G +G S +M R+  ++ + A S ATV +TGESG+GKEL A A
Sbjct: 129 DENAALKTTLA-SSFDPAGIIGQSQSMHRLMDMMASIAPSEATVLVTGESGTGKELIARA 187

Query: 233 LHRYGPRVKGPFVALNCGAIPRELMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDE 292
           +H    R  GP+V +NC A+   L+ESE+FGH +G+FTGA   R+G    A+ GT+FLDE
Sbjct: 188 IHANSQRRHGPYVTVNCAALTETLLESELFGHEKGAFTGAEKRREGRFQSADKGTIFLDE 247

Query: 293 ICEMDPNLQTKLLRFLQTGMVQKVGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYR 352
           I E    +Q KLLR +Q   +Q+VG D+  +VDVRI+ ATNRD   EV+AGRFR+DLYYR
Sbjct: 248 IGETSLPMQAKLLRAIQEREIQRVGSDQTLRVDVRIIAATNRDLRAEVEAGRFRQDLYYR 307

Query: 353 LHVIPIRLPALRDREGDVLEIADHFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQL 412
           L+V+ + +P LR+R  D+  +A HFL     +  K  +GF+P     LL +DWPGNVR+L
Sbjct: 308 LNVVTLHVPPLRERVEDIPLLAGHFLRRFTEKNGKRVKGFTPQAMDRLLKHDWPGNVREL 367

Query: 413 INVLRNVVVLNNGPEVTLGMLPQAIADADGEAIAGEAAEGESPALFRQQDIEPLWVVEKR 472
            N     VVL  G  ++   LP AIA  DG+A         +   F    +E    +E+ 
Sbjct: 368 ENAAERAVVLLVGEYISERELPHAIAGGDGDATC-------AVPRFNGMTLEE---IERA 417

Query: 473 AVERAIGACGGNIPRAAALLRVSPSTLYRK 502
           A+  A+ A  GN   AA  L ++  TL+ K
Sbjct: 418 AILDAMDASEGNKSEAARRLGITRKTLHAK 447