Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 528 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  288 bits (736), Expect = 4e-82
 Identities = 163/387 (42%), Positives = 226/387 (58%), Gaps = 2/387 (0%)

Query: 55  ILLVEDTPVQARTYLDYLDGGPWTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEI 114
           +L+++D P         ++   W++E   +G E L  L +   +++LLD+ +P MDG E 
Sbjct: 4   LLVIDDEPGHRLMVRAVMEDSGWSVEEAGSGEEGLEHLAQDRVNVVLLDMRMPGMDGQET 63

Query: 115 LRRVRSLPLSMGVVMITSNASISLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLS 174
           L R++ +   + VVM+T+  ++  AV AM+ GA D+L KP   + L   L    D  RL 
Sbjct: 64  LARIQEMYPGLPVVMLTAFGTVGSAVVAMKKGAFDYLTKPADNEELTAVLEKAWDFGRLL 123

Query: 175 REVETLRENLGIA-AFQGFVGSSAAMQRVYRLIEASAASTATVFITGESGSGKELAAEAL 233
            E E LR  L         VG+S AM RV   I  +  S AT+ I GESG+GKEL A+ L
Sbjct: 124 EENENLRRRLSDDDPTAPIVGASQAMCRVRDFIRQAGPSEATILIMGESGTGKELIAQGL 183

Query: 234 HRYGPRVKGPFVALNCGAIPRELMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDEI 293
           H    R   P V +NC A+P  L+ESE+FG+++G+FTGAV D+ G    A GGTLFLDEI
Sbjct: 184 HDASNRADQPLVKVNCAALPGHLLESELFGYMKGAFTGAVRDKPGRFQLARGGTLFLDEI 243

Query: 294 CEMDPNLQTKLLRFLQTGMVQKVGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYRL 353
            E+   LQ+KLLR LQ  +V+ +G  RP  VDVRI+ ATNRD    V+AG FREDL++RL
Sbjct: 244 GELPLELQSKLLRALQERVVEPLGAVRPVPVDVRIIAATNRDLKRAVEAGEFREDLFFRL 303

Query: 354 HVIPIRLPALRDREGDVLEIADHFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQLI 413
           +V+ +  P LRDR  D+  +A   L  +  + KK  R  SP    AL+ Y WPGNVR+L 
Sbjct: 304 NVLEVISPPLRDRLEDLPMLAGRLLERLCRKNKKGIRSVSPEFLDALMRYSWPGNVRELE 363

Query: 414 NVLRNVVVLNNGPEVTLGMLP-QAIAD 439
           NVL   ++L+    +    LP Q +AD
Sbjct: 364 NVLERALILSRSDTLGPDSLPSQVLAD 390