Pairwise Alignments

Query, 511 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 493 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  449 bits (1155), Expect = e-130
 Identities = 233/481 (48%), Positives = 307/481 (63%), Gaps = 28/481 (5%)

Query: 56  LLVEDTPVQARTYLDYLDGGPWTIEHVETGAEALAVLERRPPSLMLLDIHLPDMDGMEIL 115
           LLVED+      Y +YL      + HV  GA+AL  L    P L++LDI LPDM G++IL
Sbjct: 6   LLVEDSMSLGALYTEYLRAEDINVTHVHYGADALKELSNWQPDLLILDIKLPDMSGLDIL 65

Query: 116 RRVRSLPLSMGVVMITSNASISLAVAAMQAGANDFLVKPFSRDRLMVTLRNVIDNQRLSR 175
           ++V+     +  +MIT++ SI +A+ AM++GA DFLVKPF   RL +T+RN +  ++L  
Sbjct: 66  KQVQQSHPHISTIMITAHGSIDIAIDAMRSGAFDFLVKPFDAKRLSITVRNALKQKQLLE 125

Query: 176 EVETLRENLGIAAFQGFVGSSAAMQRVYRLIEASAASTATVFITGESGSGKELAAEALHR 235
            V     +L    +QGF+G S AMQ VY+ I+  A S A+VFI GESG+GKE+ A+A+H+
Sbjct: 126 LVTQYENSLPKGHYQGFIGDSLAMQSVYKTIDCVANSKASVFIMGESGTGKEVCAQAIHQ 185

Query: 236 YGPRVKGPFVALNCGAIPRELMESEVFGHVRGSFTGAVSDRDGAAAQANGGTLFLDEICE 295
            G R   PF+ALNC +IP+EL+ESE+FGH +G+FTGA ++RDGAA +A+GGTLFLDEICE
Sbjct: 186 VGNRADKPFIALNCASIPKELIESEIFGHCKGAFTGAHNNRDGAATRADGGTLFLDEICE 245

Query: 296 MDPNLQTKLLRFLQTGMVQKVGGDRPEKVDVRIVCATNRDPLEEVKAGRFREDLYYRLHV 355
           MD  LQ+KLLRF+QTG  Q+VGG + E VD+R + ATNR+P EEVK G FREDL+YRLHV
Sbjct: 246 MDLELQSKLLRFIQTGTFQRVGGSKEEHVDIRFISATNREPWEEVKLGHFREDLFYRLHV 305

Query: 356 IPIRLPALRDREGDVLEIADHFLASIATEEKKSFRGFSPAVAQALLAYDWPGNVRQLINV 415
           IPI LP LR R  DVL +A   L + + EE K F  F+P  A  L AYDWPGNVRQL NV
Sbjct: 306 IPIELPPLRARGNDVLLLAKQLLKTYSKEEGKKFIDFNPQAAAMLQAYDWPGNVRQLQNV 365

Query: 416 LRNVVVLNNGPEVTLGMLP----------------------------QAIADADGEAIAG 447
           +R +VVLN+   V   M P                              +       +  
Sbjct: 366 IRQIVVLNDASHVEPSMFPTPLKPLAQPQTKAQLQTKMQVEATKVDIDTLVQVASRELLS 425

Query: 448 EAAEGESPALFRQQDIEPLWVVEKRAVERAIGACGGNIPRAAALLRVSPSTLYRKKQAWE 507
           E+ +        QQ I+PLW+ EK+ +E AI  C GN+P+AAALL +SPST+YRK+  WE
Sbjct: 426 ESTQEAHTHTADQQRIQPLWLTEKQTIEGAIALCDGNVPKAAALLDISPSTIYRKRMTWE 485

Query: 508 E 508
           E
Sbjct: 486 E 486