Pairwise Alignments

Query, 296 a.a., MotA/TolQ/ExbB proton channel (NCBI) from Rhodospirillum rubrum S1H

Subject, 227 a.a., protein TolQ from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 1e-37
 Identities = 88/195 (45%), Positives = 115/195 (58%), Gaps = 12/195 (6%)

Query: 79  DFSALGLFLQADPVVKGVMGLLVVASIAVWAVILDKAVRLVIARREARAFE-RAVAANDL 137
           D S L LFLQA  +VK VM  L+  S+A WA I+ ++  +  A REA  FE R  +  DL
Sbjct: 4   DISFLDLFLQASFLVKMVMLTLLGMSVASWAAIIKRSKVISAAEREADTFEDRFWSGMDL 63

Query: 138 SAVMLKGGMATTVVRSAHEAW----------QDYQPGEARSVRRDGIERAMRLTVNAELR 187
            A+          +    E +          +   PG    V  +G  RAMR+ V  E+ 
Sbjct: 64  GALYQDVKKRKDDIYGIEEIFYAGFTEFARLRKTNPGAPDFVM-EGTGRAMRVAVAREVD 122

Query: 188 KLEVGLPLLASVGSAAPFVGLFGTVWGIMHSFTSIAQSNDTSLAVVAPGIAEALFATAIG 247
            LE  LP LA+VGS +P++GLFGTVWGIMH+F ++ +    +LA+VAPGIAEAL ATAIG
Sbjct: 123 SLETSLPFLATVGSISPYIGLFGTVWGIMHAFIALGEVKQATLAMVAPGIAEALIATAIG 182

Query: 248 LVAAIPAVLAFNALS 262
           L AAIPAV+A+N LS
Sbjct: 183 LFAAIPAVMAYNRLS 197