Pairwise Alignments

Query, 831 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  446 bits (1147), Expect = e-129
 Identities = 286/787 (36%), Positives = 423/787 (53%), Gaps = 49/787 (6%)

Query: 29  SDLPDYGALANYEPPITTRVLASDGRLMAEYAIEKRVYVPINAIPQKVKDAFLSAEDKNF 88
           SDLPD   L + +     +V + DG+L+A++  ++R+ + +  +P+++ +A ++ ED  +
Sbjct: 41  SDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRY 100

Query: 89  YTHSGVDFVGLFRAVLTNLQNYGSGRRPVGASTITQQVAKNFLLTNEVSFDRKVKEAILA 148
           Y H G D +G+ RA    L    SG    GASTITQQ+A+NF L+NE    RKVKE  +A
Sbjct: 101 YEHYGFDPIGITRAAFAVL---ASGSASQGASTITQQLARNFFLSNEKKVMRKVKEIFIA 157

Query: 149 FRIEEAFSKDHILELYLNEIYLGFSSYGVAAAAVNYFNKSLDELTIGEVAFLAALPKAPN 208
             IE+  SK  ILELYLN+IYLG+ SYGV AAA  YF K + +LT+GE+A +A LPKAP+
Sbjct: 158 IHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPS 217

Query: 209 NYNPVRKNDAAKARRDWVVDRMVEDDHITQAEGEAAKAEPLEVRSRDETQLVRHADFFSE 268
             NP+   + A  RR+ V+ RM+++ +IT+AE +AA+AEP+ +      ++  +A + +E
Sbjct: 218 TMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPV-LPKYHGAEIELNAPYVAE 276

Query: 269 EVRRQLQSRYGEEALYKGGLYVRTTLDPRLQEIGARALRKGLIDYDRRHGWRGPVTRLEN 328
             R  +  RYGEEA Y  G+ V TT+D +LQ    +A    L+ YD RHG+RG    L  
Sbjct: 277 IARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAANQAAINNLLAYDERHGYRGAEKELWQ 336

Query: 329 VQE--WKA-RLAELPVPPGASTNWRLAAVLRLDAGEVKLGLPDGFGGAIPMKEMAWARPT 385
           V +  W + +L+E         +   AAVL ++    ++ +       I  ++M WAR  
Sbjct: 337 VNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVKSYGVQTIAWEDMNWARRF 396

Query: 386 LDGQRVGNAPKKPADVLKVGDVVLVEPLEKDDKGKAYAPGTYGLRQMPNVEGALVAMDPH 445
           ++  R G  PK   + L  G  + V P  +D      A   + L Q+PN   A VAM+P 
Sbjct: 397 INDDRQGPLPKSANEFLAAGQQIWVRPRTQDG-----AITAWKLTQVPNANTAFVAMNPE 451

Query: 446 TGRVMAMVGGFAPERSEFNRAIQAKRQPGSSFKPFVYLAALDHGYTPATIILDAPF-VYD 504
            G V A+VGGF    ++FNRA Q+ RQ GSS KPF+Y AAL+ G T AT+I DAP   +D
Sbjct: 452 NGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLINDAPINQWD 511

Query: 505 PGPGQPLWKPKNYSGQFYGPSTLRRGVEMSRNLMTVRLANAVGMDVVAEYAERFGV-VHT 563
              G   W+PKN    + GP+ LR G+  S+N+M VR+   VG+D   EY  RFG  +  
Sbjct: 512 ESQG-TAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLTRFGFKLDQ 570

Query: 564 MPRVLAASLGAVETTVMDMTTAYAMLVNGGRRIAPTLIDRIQDRTGTTVYRHD-----ER 618
           +PR    +LGA   T + M   +++  N G  + P  I R+++  G   +  +      R
Sbjct: 571 LPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSAEPKVVCHR 630

Query: 619 PC----DACKASQWAGQAVPAVVDNREIMTDPLSAYQIVSILQGVVQ-------RGTGGK 667
            C    D       A    P V+  +      L+   + S + G  +        GTG +
Sbjct: 631 ECSSELDEFAEQDAASPYAPKVISEQNAF---LTREMLYSNIWGGGEWSSDTGWNGTGWR 687

Query: 668 VQAV-GKSVAGKTGTSNDSLDTWFVGFSPDLVCGVFVGFDE-PKSLG------------- 712
            QA+  + + GKTGT+NDS D W+ G++P +V   +VGFD+  ++LG             
Sbjct: 688 AQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRNIEDDVS 747

Query: 713 SHEAGSTTAAPIFTTFMKEALADKPDIPFRVPEGIKFVRIDPQTGQRAGPGTSNAILEAF 772
             E+G  TA P +  FM  AL D P     VP  I  VRID  TG       S+++ E F
Sbjct: 748 GAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRDTGLLTNKLDSSSMFEYF 807

Query: 773 KPGSEPS 779
           + G+EP+
Sbjct: 808 EAGTEPT 814