Pairwise Alignments

Query, 468 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (362), Expect = 7e-39
 Identities = 86/247 (34%), Positives = 137/247 (55%), Gaps = 6/247 (2%)

Query: 41  PTQAFAGYASIVVDASTGRVLQARNADMRNYPASLTKMMTLYLLFEAIDNGKYTLESRLP 100
           P  A  GY  +++D  TG+VL   NA  +  PASLTK+MT Y+  + +  G    + ++ 
Sbjct: 33  PQLAANGY--VLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVR 90

Query: 101 VSKWA-ANQAP--SKLGVAAGTGIKVEHAIKALVTKSANDVAVVIAEALGGTEANFSALM 157
           +S  A A + P  SK+ +  GT + +    + L+ +S ND +V IAE + G+E  F +LM
Sbjct: 91  ISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLM 150

Query: 158 TRKAAALGMSQTTFRNASGLPNNGQMTTARDMAVLSMALIRHFPNHYRFFATQSFRFGNR 217
              A  LGM+ ++F N  GL N    +T  D+A+L  A+IR  P  Y  ++  SF +   
Sbjct: 151 NSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYNGI 210

Query: 218 TITTHNHVVREYP-GADGLKTGYIQASGFNVASSAVRNGRRLVAVVFGGQTARARDTQMM 276
           T    N ++R+     DG+KTGY   +G+++ASSA     RL++VV G ++ ++R+ +  
Sbjct: 211 TQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESK 270

Query: 277 ALLDEGF 283
            LL  GF
Sbjct: 271 QLLSYGF 277