Pairwise Alignments

Query, 468 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (373), Expect = 4e-40
 Identities = 90/247 (36%), Positives = 132/247 (53%), Gaps = 6/247 (2%)

Query: 41  PTQAFAGYASIVVDASTGRVLQARNADMRNYPASLTKMMTLYLLFEAIDNGKYTLESRLP 100
           P  A  GY  +++D  +G+VL  +  D +  PASLTKMMT Y++ + +  G  +L   + 
Sbjct: 35  PQIAAKGY--VLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVV 92

Query: 101 VSK--WAAN-QAPSKLGVAAGTGIKVEHAIKALVTKSANDVAVVIAEALGGTEANFSALM 157
           +SK  WA N    SK+ V  GT +KV    + ++ +S ND  V +AE + GTE  F  LM
Sbjct: 93  ISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLM 152

Query: 158 TRKAAALGMSQTTFRNASGLPNNGQMTTARDMAVLSMALIRHFPNHYRFFATQSFRFGNR 217
              A++LGM  + F N+ GL +    +T  D+A+L  ALIR  P  Y  ++ Q F +   
Sbjct: 153 NAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGI 212

Query: 218 TITTHNHVVREYP-GADGLKTGYIQASGFNVASSAVRNGRRLVAVVFGGQTARARDTQMM 276
           T    N ++ +     DG+KTG+   +G+N+ SSA     RLVAVV G     AR  +  
Sbjct: 213 TQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESK 272

Query: 277 ALLDEGF 283
            LL  GF
Sbjct: 273 KLLSYGF 279