Pairwise Alignments

Query, 468 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 529 a.a., putative D-alanyl-D-alanine carboxypeptidase from Phaeobacter inhibens DSM 17395

 Score =  237 bits (604), Expect = 8e-67
 Identities = 177/515 (34%), Positives = 252/515 (48%), Gaps = 87/515 (16%)

Query: 27  ILAMLAVVFLLLGLPTQAFAG-YASIVVDASTGRVLQARNADMRNYPASLTKMMTLYLLF 85
           +L ++  + ++   P  A A  YA++V+DA TG VL +RNAD R +PASLTKMMTLY+ F
Sbjct: 26  VLGLVIFLSMVATAPPGAMAAPYAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIAF 85

Query: 86  EAIDNGKYTLESRLPVSKWAANQAPSKLGVAAGTGIKVEHAIKALVTKSANDVAVVIAEA 145
           EA+ NG+ +L++++ +S+ AA++ PSKLG+  G  I   + I+A   KSAND A  I E 
Sbjct: 86  EAVRNGEISLDTKVKISRNAASEQPSKLGLKTGQRIAFRYLIRAAAVKSANDAATAIGET 145

Query: 146 LGGTEANFSALMTRKAAALGMSQTTFRNASGLPNNGQMTTARDMAVLSMALIRHFPNHYR 205
           L G+EA F+  MTR A ALGMS+TTF+NA GL   G M+TARDM  L   L+  +P +Y 
Sbjct: 146 LAGSEAAFARRMTRTAKALGMSRTTFKNAHGLTQKGHMSTARDMTTLGRHLLYDYPEYYN 205

Query: 206 FFATQSFRFGNRTI-TTHNHVVREYPGADGLKTGYIQASGFNVASSAVRNGRRLVAVVFG 264
            F+ +S   G R +  T+  ++  Y GADG+KTGY +A+GFN+ +SA R   R++A VFG
Sbjct: 206 LFSRRSTDAGVRKVPNTNRRLLAAYRGADGIKTGYTRAAGFNLVASAERGNERVIATVFG 265

Query: 265 GQTARARDTQMMALLDEGF------ATLAREGGSVVQAKR-------------------K 299
           G+++ +R+ ++  LLD GF      A L R      Q  R                   K
Sbjct: 266 GKSSTSRNAKVAELLDLGFRRAPSRAKLRRPARPPYQGNRGLGTQLASAGDSTPNGAAGK 325

Query: 300 PDAIASIIKAKEPPAADMGSAD-----------------DAP----------MPPAYKPG 332
              ++ ++K    P     SA                  DAP            P     
Sbjct: 326 TIRVSGLVKTSLRPKGRPASAAPEVPTLLAEAQTDTATVDAPTIETPTAASEAAPKLDRD 385

Query: 333 SLTASVSGGRTQQMALATPMRSSPAPSAKSAPGPRPTPIAR--------TTPVP-----S 379
            L AS++    +   +A     + AP AK  P     P+AR        TT  P     +
Sbjct: 386 VLQASITAAIAEAEVIAAVAEQASAPIAKPRPFVGLRPMARPARLAENQTTAEPEPVVVT 445

Query: 380 KGAAKGD--WGIQVGAYA------KSAAATAAANKAIGLLAAEARRQVSPVVVQRKSGSG 431
           + +  G   WGI VG Y       K    TA A  A   L    R+     VV+   G  
Sbjct: 446 RLSTSGGRYWGINVGRYGSRYQAEKVLLRTALAEMA--TLDGSLRK-----VVRTPRG-- 496

Query: 432 TIYRARLTGLSNEAAARTACATLVRNDHSCLVVAP 466
             + A   G++ E+AA  AC  L   + +C  V P
Sbjct: 497 --FDANFLGMTKESAA-LACRRLSARNITCDTVGP 528