Pairwise Alignments

Query, 779 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) from Rhodospirillum rubrum S1H

Subject, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

 Score =  899 bits (2322), Expect = 0.0
 Identities = 455/753 (60%), Positives = 579/753 (76%), Gaps = 6/753 (0%)

Query: 1   MLSRNLEQTLHRALALASQRRHEYATLEHLLLALVDDQDAVSVLKACSVDVEKLRKQLAE 60
           ML++ LE +L+ A A A  +RHE+ T+EHLLLAL+++  A   L AC  D++ LR++L  
Sbjct: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60

Query: 61  FVEHELTGLVVAAPEG-DPKPTAGFQRVVQRAAIHVQSSGREQVTGANILVALFSERESH 119
           F++ + T L+    E  + +PT  FQRV+QRA  HVQSSGR +VTGAN+LVA+FSE+ESH
Sbjct: 61  FID-QTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESH 119

Query: 120 AVYFLQMQDMTRLDAVNYISHGIAKAPGHGQARAPRGADEETKSEETATVKKGREALDAY 179
           A Y L+  D++RLD VN+ISHGI KA  H +  +         SEE +      E L+++
Sbjct: 120 AAYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSA----DERLESF 175

Query: 180 CVNLNEKAAEGKIDPLIGRDQEVERTIQILCRRNKNNPLLVGDPGVGKTAIVEGLARRIV 239
             NLN+ A +G+IDPLIGRD+E+ERTIQ+LCRR KNNPLLVG+ GVGKTAI EGLA RIV
Sbjct: 176 ATNLNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIV 235

Query: 240 HKEVPEVLHNATIFSLDMGALLAGTRYRGDFEERLKAVVGELEAYEGAVLFIDEIHTVIG 299
              VPEV+  + I+SLD+G+LLAGT+YRGDFE+R K+++ +LE  + A+LFIDEIHT+IG
Sbjct: 236 EGNVPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIG 295

Query: 300 AGATSGGSMDASNLLKPALAQGLLRCVGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSVE 359
           AGA SGG +DA+NL+KP L+ G LRC+GSTTY+E+ N FEK+RAL RRFQKID+ EPS++
Sbjct: 296 AGAASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLD 355

Query: 360 DTVKILRGIKSYYEDHHKVRYTNDAVRAAVELSNKYINDRKLPDKAIDVIDEVGAARMLL 419
           DT KIL G+K+ YE HH VRYTN A+RAAVELS KYIN+R LPDKAIDVIDE GA   L+
Sbjct: 356 DTTKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLM 415

Query: 420 PESRRRKTVTVRDIEEIVAKIARIPPKSVSRDDQAVLKSLERDLKTMVFGQDQAIEALAS 479
           P SRR+KTV V +IE +VAK+ARIP KSVS  D+ +LK+L++ +K +VFGQD AI+ L  
Sbjct: 416 PASRRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTE 475

Query: 480 AIKLARAGLREPTKPIGNYLFSGPTGVGKTEVARQLARILGIELVRFDMSEYMERHSVSR 539
           AIKL RAGL    KP+G++LF+GPTGVGKTEV  QL+++LGIEL+RFDMSEY ERHSVSR
Sbjct: 476 AIKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSR 535

Query: 540 LIGAPPGYVGFDQGGLLTDAVDQQPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGK 599
           LIGAPPGYVG+DQGGLLTDAV + PH V+LLDEIEKAHPD+FN+LLQVMD+G LTD+NG+
Sbjct: 536 LIGAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGR 595

Query: 600 HVDFRNVILIMTTNAGAQMLAKNAMGFGRETRSGDDTEEIERSFSPEFRNRLDAIIPFAN 659
             DFRNVIL+MTTNAG     K ++G  ++  S D   EI++ F+PEFRNRLD II F +
Sbjct: 596 KADFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNS 655

Query: 660 LAAETVGMVVDKFVMELEAQLADRNVTIELTDKARSWLAEKGYDRRMGARPLARIIQETI 719
           L    +  VVDKF++EL+AQL  R V++E+++ AR WLA KGYDR MGARP+ R+IQE +
Sbjct: 656 LDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQL 715

Query: 720 KKPLAEELLFGKLTKGGRVKVGVKDGKPDFAFF 752
           KKPLA ELLFG L  GG VKV + D +  F +F
Sbjct: 716 KKPLANELLFGSLVDGGTVKVTLSDDRLAFEYF 748