Pairwise Alignments

Query, 478 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  257 bits (657), Expect = 5e-73
 Identities = 160/422 (37%), Positives = 235/422 (55%), Gaps = 16/422 (3%)

Query: 49  DLVVLDLGLPDMDGLEILRKLGGPAAMPPTVVLTGSGSVRRAVEAMREGAIDFLVKPCGA 108
           D++V D+ +P MDG+ +L ++       P +++T    +  AV A ++GA ++L KP   
Sbjct: 49  DVLVSDIRMPGMDGIALLNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDV 108

Query: 109 DKLRTAVEEALERRTPTAEGRAPAADPTRAKRGPSGFLGSSPAMSNVFSLIEAAAASSTA 168
           D+  T VE A+       E R  +  P+     P   +G +PAM  VF  I   + SS  
Sbjct: 109 DETLTLVERAIAHGQ---EQRKTSHRPSENYSAPE-IIGEAPAMQEVFRAIGRLSRSSI- 163

Query: 169 SVFITGETGTGKELCANAIHNLSDRRNGPFVAINCGAIPRELMESEIFGHRKGAFTGAIN 228
           SV I GE+GTGKEL A+A+H  S R   PF+A+N  AIP++L+ESE+FGH KGAFTGA  
Sbjct: 164 SVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANT 223

Query: 229 DREGAASRADGGTLFLDELCEMDLDLQVKLLRFIQTGTYRKVGDGADRQVNIRFVCATNR 288
            R+G   +A+GGTLFLDE+ +M LD+Q +LLR +  G + +VG     +V++R V AT++
Sbjct: 224 VRQGRFEQANGGTLFLDEIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQ 283

Query: 289 DPLVEVKAGRFREDLYYRLYVVPIHLPPLSARGDDIILLARRFLADFSKLEGKRFQEFSA 348
           +    V  G+FREDL++RL V+ IH+P L  R  DI  L + FLA  +K  G   +  + 
Sbjct: 284 NLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNP 343

Query: 349 DALGRIMAYRWPGNVRQLENVVRNIVVLNDGVTVEPTMLPPPLDCVEAVVSLPVD----- 403
             +  +    WPGNVRQLEN+ R + V+  G  V P+ LP  L           D     
Sbjct: 344 RTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDISWQK 403

Query: 404 --PQSATGAVVGGGTLSLDEILARPLAELEAMAIDAALRLSDNNVTRAARLLDVSPSTIY 461
                A  A+  G T    E+LA  L E E + ++AAL  ++ +   AA++L    +T+ 
Sbjct: 404 QLETWAKSALASGET----ELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLT 459

Query: 462 RK 463
           RK
Sbjct: 460 RK 461