Pairwise Alignments

Query, 209 a.a., Hemerythrin HHE cation binding region (NCBI) from Rhodospirillum rubrum S1H

Subject, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 21/213 (9%)

Query: 1   MAPHSWSNRYATGLRAIDDDHRGLFELVD----ALEEHHEKASGSSLVAATIAALQVYAA 56
           M    W   + TGL  +D+ H+ L  +V+     L E+H        +   +  L  Y+ 
Sbjct: 1   MQSFKWDQYFETGLEEVDEQHQSLVNIVNRYSSLLAENHVSLDE---IRLALFELSRYSE 57

Query: 57  EHFAREERFMRKAHFP--DFERHHRIHEDFRALVDALARFQGQSPDSVDLGRVTRFLNRW 114
            HF  EE+ MR+        E H ++H  F + V ++  F     D     ++  FL  W
Sbjct: 58  YHFKEEEKLMREVGISALHLEEHIQVHRTFMSEVFSMQAFI-HDVDDRSAVQLLEFLIHW 116

Query: 115 IGEHILVKDMEYLPYV-------TGEATGTPHSLEKPALTELTVHVPAEKRDAVIQFAAL 167
           +  HIL  D      V       + E        EK A TE  ++      D V +    
Sbjct: 117 LAYHILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRE 176

Query: 168 LTEGGEIAEALEQALSTRLRQRFERFDRQAHAL 200
           L    ++ ++LE+ +  R +Q ++  +RQ  AL
Sbjct: 177 LV---KLNQSLEEKVIERTQQLYQ-VNRQLEAL 205