Pairwise Alignments

Query, 561 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

Subject, 563 a.a., putative Methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  333 bits (853), Expect = 1e-95
 Identities = 224/572 (39%), Positives = 317/572 (55%), Gaps = 29/572 (5%)

Query: 4   LNNLSVGRKLILVFSLLFLMVACLGGFSIKALSDMNGAATDVSQTRLPAIDKARSLQFLI 63
           L  +S+  K+  V ++L ++ A +GG     +   +     +            S + LI
Sbjct: 5   LARISISGKIYSVVAILGVVAAIIGGVGSFGMQTYDDKFDQIQNW---------SRRALI 55

Query: 64  SRLRTNQMAYMVAQGS-GLETTRKTVEQTE--KVLAATRAEYEKLMSSAE------EREA 114
           +  + N + Y V   S G+     T + T   K +     E EKL++  E       + A
Sbjct: 56  NE-QINSLIYKVVMDSRGIYAADGTADATPYAKNIVGATGELEKLVAKLETLLPPDSKAA 114

Query: 115 YKTFADNYAGFAAGLVRIADLSKAGRIDEAREL-TWGETRPFYLALVKSTDRLTE----- 168
           +         F      +A L      D+ARE     E R     L +  ++ +E     
Sbjct: 115 FGETQQTARAFVLHRNEVARLGMEVGPDKAREHGDTPEARALRSKLGQFLEKASERNMQG 174

Query: 169 LSQIQAAVAAANIDHTNRIARIGIIAALIAVLIVAAVAGALLRQTIAAPLLALRATMERL 228
           + +    + A N   T  +  +GI   L A+ +   VA    R  I+ P+  +   M RL
Sbjct: 175 IDKANEELTAVNSLMTTLMMVVGIGGGLGALALSVLVA----RIGISRPIAGITDVMARL 230

Query: 229 ARDDTAVDIPGHNRKDEVGAMARAVLVFKDSMIESQGLRARENAERASQEQRAATLSLLT 288
           A  DT+V +PG +R DE+G MA+AV VFKD+ ++ + +R  E AER ++E+R   +  L 
Sbjct: 231 ATGDTSVTVPGLSRGDEIGGMAKAVAVFKDNAVDRERMRVAEEAERRAKERRTHAVEELV 290

Query: 289 QDFDTKASSVINDVAEAAGTMQTTASQLTQATESTAEQSTAVAAAAQEASTNVQTVAAAA 348
           Q FD   S ++  VA AA  ++ TA  +    + T  Q+ + AAAA++AS NVQTVAAA 
Sbjct: 291 QSFDRNVSGILRTVASAATELEATAQSMLTTADQTKGQAASTAAAAEQASVNVQTVAAAT 350

Query: 349 EELTSSIGEISRQIAQASHVSQKAVDQAAHTTGIVGGLEQAAKRIGEVVAMINDIASQTN 408
            EL++SI EIS Q+ ++++++  AV +A  T   V GL   A+RIG+VV  I DIASQTN
Sbjct: 351 NELSASINEISGQVTRSTNIASHAVGEAQQTNERVQGLVAQAQRIGDVVKAITDIASQTN 410

Query: 409 LLALNATIEAARAGDAGKGFAVVAGEVKSLANQTARATDDITQQIGSVQTATGAAVQAIN 468
           LLALNATIEAARAG+AGKGFAVVA EVK+LANQTA+AT++I  QI S+Q ATG A  AIN
Sbjct: 411 LLALNATIEAARAGEAGKGFAVVASEVKNLANQTAKATEEIASQIASMQEATGGAAAAIN 470

Query: 469 EIATTIGEINEISANIAAAMEQQGAATQEIARNVEQAATGTDQVTRNIHGVNQTVDNTGQ 528
            I  TIG I+EI+  IA+A+E+QG+AT EIARNV+QAA GT  VT NI  V+     TG 
Sbjct: 471 GIGDTIGTISEIATIIASAVEEQGSATGEIARNVQQAAQGTHLVTTNITEVSDGATQTGS 530

Query: 529 SAKDVLNAATRLRDESAAMQTLVTTFLDKVRA 560
           +A  VL AA  L  +S  ++T V  FL  +RA
Sbjct: 531 AATQVLGAAGELSRQSEVLRTEVERFLAGIRA 562