Pairwise Alignments

Query, 333 a.a., chaperone DnaJ (NCBI) from Rhodospirillum rubrum S1H

Subject, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 171 LDLTIPPGTRDGEILRLKGKGAPGLNGGEAGDGLVEISVPPHPAFQRDGDDIVIEVPITL 230
           L++ IP G   G+ +RL G+G  G  G  AGD  V++ V  H  F+RDG+++  EVP++ 
Sbjct: 217 LNVKIPAGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSF 276

Query: 231 DEAVLGGKIEVPTISGKVAMTLPPGTTSGDVLRLRGKGIHPANRPA-GDQRVILKIALPP 289
             A LGG++EVPT+ G+V++ +P  T +G + R+RGKG+      A GD  V L +  P 
Sbjct: 277 AMAALGGEVEVPTLDGRVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPV 336

Query: 290 AIDGALANFLSQWRK 304
            +       L ++ +
Sbjct: 337 NLSARQKELLKEFEE 351



 Score = 93.2 bits (230), Expect = 9e-24
 Identities = 85/283 (30%), Positives = 125/283 (44%), Gaps = 45/283 (15%)

Query: 3   KDPYRILGVGKDATADDIRKAYRKLAKASHPDLHPGDPQAAATFRELAAAHDILGDSAKR 62
           +D Y +LGVG+DA+  DI+KAY++LA   HPD + GD  AA  F+E+  A++IL D+ K+
Sbjct: 4   RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63

Query: 63  ARFDRGEIDASGAERAPERPSSAPGGPGSGASSRYYYRDYADAGATGGYGTTAGFEDFED 122
           A +D+                      G  A  +        AG  GG G   G  DF D
Sbjct: 64  AAYDQ---------------------YGHAAFEQ-------GAGGFGGGGFGGGGADFGD 95

Query: 123 L-SDLFSAGLGRGRKGPRP----GRDLRFHLTLDFLDAANGLRKRVTLPDGPVLDLTIPP 177
           +  D+F    G GR+G  P    G DLR+++ L   +A  G  K + +P     D     
Sbjct: 96  IFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGS 155

Query: 178 GTRDGEILRLKGK-GAPGLNGGEAGDGLVEISVPPHPAFQRDGDDIVIEVPITLDEAVLG 236
           G + G   +  G     G      G   V+ + P        G   +I+ P  +     G
Sbjct: 156 GAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCP-----TCHGKGKIIKDPCNVCHG-QG 209

Query: 237 GKIEVPTISGKVAMTLPPGTTSGDVLRLRGKG-IHPANRPAGD 278
            K +  T++ K+    P G  +GD +RL G+G       PAGD
Sbjct: 210 RKQKTKTLNVKI----PAGVDTGDRIRLSGEGEAGEMGAPAGD 248