Pairwise Alignments

Query, 326 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  191 bits (485), Expect = 2e-53
 Identities = 110/317 (34%), Positives = 178/317 (56%), Gaps = 17/317 (5%)

Query: 6   FALRRLATSIPSLLIILVGVFLLLQLAPGDTVDALLAQMGGGDAQIIETLRHFYGLDAPV 65
           F  +R   S+ SL+ ++V VF L ++  GD     L       A++ E  R  +GL+ P+
Sbjct: 4   FIRQRALASLISLIGLIVMVFFLSRMT-GDPAALFLPVEAS--AEMKEQFRELHGLNDPI 60

Query: 66  AVQLGRYLLRLVQFDLGYSAIYGKPVIDVIVERLPVTLLLMGASLVVAVSGGVALGVLAA 125
            VQ  RY+  +V  DLG S    +P +DV++E    TL L   ++ +     + +G L A
Sbjct: 61  LVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLGA 120

Query: 126 RRVNKWPDTLISTLGLVFYATPSFWLGLMAVVVFAVKLGWLPPGGFEEVGAGYQGLTRAL 185
            R   + D L S + L+  + P FWL ++A+V+F++    LP  G   V           
Sbjct: 121 FRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVV---------- 170

Query: 186 DIARHMALPTITLSLIFLATYLRIMRASMLEVSSLDFVRTARAKGVDETKIVTHHVLRNA 245
               H  LP   L +      ++++R SM+   S  +V+TARAKGV    I+  H LRNA
Sbjct: 171 ----HWILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNA 226

Query: 246 LLPMLTLIGLNASTMLGGSVVVESVFTLPGLGRLAYESVVQRDLNTLLGIVLLSAVLVIV 305
           +LP++T++G  A+++L G+VVVE++F  PG+G+L  +S++QRD N +L  +L++A+ + +
Sbjct: 227 MLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFL 286

Query: 306 VNFIVDLLYARLDPRIR 322
           +N ++DL YA LDPRIR
Sbjct: 287 MNVLIDLAYALLDPRIR 303