Pairwise Alignments

Query, 326 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  201 bits (511), Expect = 2e-56
 Identities = 116/320 (36%), Positives = 189/320 (59%), Gaps = 17/320 (5%)

Query: 3   LFLFALRRLATSIPSLLIILVGVFLLLQLAPGDTVDALLAQMGGGDAQIIETLRHFYGLD 62
           +F F LRR   S+ +++ +LV VF L +L  GD    L   +   +AQ  +     +G +
Sbjct: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLT-GDPA-YLYLPLDSSEAQR-QAFSETHGFN 57

Query: 63  APVAVQLGRYLLRLVQFDLGYSAIYGKPVIDVIVERLPVTLLLMGASLVVAVSGGVALGV 122
            P+ VQ GRYL+ L +FD G +    +P ++V +E  P TL L   ++V+++   V +G 
Sbjct: 58  DPLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGS 117

Query: 123 LAARRVNKWPDTLISTLGLVFYATPSFWLGLMAVVVFAVKLGWLPPGGFEEVGAGYQGLT 182
           LAA R N   D + ST  L   + P FW+ ++A++VF+V LG LP  G            
Sbjct: 118 LAAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSG------------ 165

Query: 183 RALDIARHMALPTITLSLIFLATYLRIMRASMLEVSSLDFVRTARAKGVDETKIVTHHVL 242
                A H  +P   L+L      ++++R +M+   +  +V+TARAKGV+ ++IV  H L
Sbjct: 166 --TGTALHWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHAL 223

Query: 243 RNALLPMLTLIGLNASTMLGGSVVVESVFTLPGLGRLAYESVVQRDLNTLLGIVLLSAVL 302
           RN+LLP++T+ G  A++++ G+VVVE++F  PG+G+L  +++V+RD   +   VL++A+ 
Sbjct: 224 RNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIA 283

Query: 303 VIVVNFIVDLLYARLDPRIR 322
           + V+N  +DL+YARLDPRIR
Sbjct: 284 IFVLNIAIDLVYARLDPRIR 303