Pairwise Alignments

Query, 276 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (453), Expect = 9e-50
 Identities = 102/287 (35%), Positives = 164/287 (57%), Gaps = 20/287 (6%)

Query: 7   YFRNPSAVLGLVLLIAVLGLALSADLLFPRDPLAL-------AGRPLQWPLD-NPRFWLG 58
           + R+  A+    + +  + +A+SA L+ P +P  L       A  P  W    N  F LG
Sbjct: 23  FLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLG 82

Query: 59  TDNSGRDIAAQIFHGARLSLVIGVVATSIAIALGVLVGALAGYYGGLVDDALMRITDAFQ 118
           TD  GRDI + I +G+RLSL IG +A  + + LG+++G  AGY+GG +D  LMR  D   
Sbjct: 83  TDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQL 142

Query: 119 TLPNFLLLLLLIAVFGSR----------IETVVIAIGIVSWPAPARLTRAEFLSLRGREF 168
           +    ++ +++ A+F +           +  +V+ IG+  WP  AR  RA  L+ + +E+
Sbjct: 143 SFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEY 202

Query: 169 VQAARLAGLRDLRLIFREILPNALPPIIVYASVVMATAILLESALAFLNLSDP-NVSSWG 227
           V+AAR+ G +  R++FR ILPN L PI+V ++V +A AI+ E+AL+FL L  P +  S G
Sbjct: 203 VEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLG 262

Query: 228 NLIGQG-RGVLRSEWYVSAIPGFAILLTVLAVSLVGQGLNDALNPRL 273
           +LI  G   +    W+++A PG  ++L VL ++L+G  L D  NP++
Sbjct: 263 SLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309