Pairwise Alignments

Query, 304 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 16/278 (5%)

Query: 1   MDLRQMRYFLAVVDAGSFSAAARALRVAQPALSQSLKRLEDEVGAALLHRLPRGTLPTEE 60
           M++R   Y +A+ D   F  AA A  V+QP LS  +++LEDE+G  LL R  R  L TE 
Sbjct: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60

Query: 61  GLLLAAEGRRLLAEWDGLGGLLRARRDDPAGDLAIGIPTSLGPVVSLAVARLVARRLPKV 120
           GL L  + +++L+E      +   +     G L IG   +LGP +   +   +  R P++
Sbjct: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120

Query: 121 RLRLIEGLSGHIMGWLRDGTLDLGLVFNGETGGDLGVEPLASECLALIAP-----AASSL 175
            L L E  +  ++  L +G LD  ++ + E         L +E L++  P     AA   
Sbjct: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180

Query: 176 PTPIPLNAAAALPLILPGPPHGLRDEVERAFASRGLVAKVCLEIDALDPINTLVAEGFGY 235
              + L     L L   G  H LRD+      + G       +  +L+ +  +VA G G 
Sbjct: 181 VDMLELKGKTVLAL---GDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGI 237

Query: 236 SILSPRVAL----QSTGAALVRVIPIIDPPITRRIGLA 269
           ++L P +AL       G   +R    ++P  +RR+ LA
Sbjct: 238 TLL-PELALPEDKTKDGVCYLRA---VNPIPSRRLVLA 271