Pairwise Alignments

Query, 599 a.a., ErfK/YbiS/YcfS/YnhG (NCBI) from Rhodospirillum rubrum S1H

Subject, 523 a.a., peptidoglycan-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  213 bits (543), Expect = 1e-59
 Identities = 159/483 (32%), Positives = 235/483 (48%), Gaps = 52/483 (10%)

Query: 116 ASPRGLALIAALEGASEEGIDREAYRLGEIKRLLARTTPADAQTADLLMGRAFLLFATDR 175
           A+ R  AL A ++  +++G+D + Y L             DA  AD+ + + +L    D 
Sbjct: 74  ANGRLSALQAQVQQLADDGLDPKRYSLP------TSAAEVDAVCADIGISQRYLQALQDL 127

Query: 176 LLGQSRR----------ALPFSERLALLAREEGVIPEDLLANAGAA-PDFGLFLATLAPP 224
             G+ R+          ALP+              P ++LA AG    D         P 
Sbjct: 128 RYGRLRQSRFEPLWHAQALPYDR------------PAEVLAIAGPGLQDMATAFQLARPS 175

Query: 225 TPQYDLLRQGLVRYQALARDGGWPTDLADGASIKPGDRDPRLPEMRRRLAAEGLVVGSDP 284
             QY  LR+   R +       W   LA G  ++PG +D R+PE+ +RL  EG +     
Sbjct: 176 LEQYQSLRRVYARQRQRPLPH-WQA-LASGPLLQPGAQDARVPELAKRLFNEGYLAN--- 230

Query: 285 TFIGPPDAELLDDFLVEAVRIFQAAHGLSADGVIGRGTLVDMNTTPAQRITQIRVALERW 344
             +      + +  LV A++ FQ +H L ADGV+G GTL ++N +PA R  Q+RV LER+
Sbjct: 231 --VSAGVGTVYNKELVSALKSFQLSHSLQADGVLGEGTLTELNVSPALRREQLRVNLERF 288

Query: 345 RLLPRALGQTHLLVNVPQYQLYLNEGRTTVLSMRVAVGRQDFETPLFSDTLRYMEFNPYW 404
           R L + L    LLVNV    L + +G T V   R  VGR + +TPL   ++  +  NP W
Sbjct: 289 RWLAQDLEPNGLLVNVAAATLTVYQGGTPVWQTRTQVGRAERQTPLLKSSVTRLTLNPTW 348

Query: 405 NVPISIAQAEVIPKQIENSAYLAKKGFTVLPRGVEGWDDGVGH----ESVDWKADAARSY 460
            VP +I + + +P+   + A+L K+   VL        D  GH    + +DW  D   + 
Sbjct: 349 TVPPTIMREDKLPEIRRDQAFLGKQNLQVL--------DSDGHPLAVDEIDW--DNPGNI 398

Query: 461 RLRQDPGPANPLGTVKFMFPNEYAVYLHDTNSRGVFDRSARAVSHGCVRVQEPALLANYI 520
            LRQD GP NPLG +   FPN +AVYLHDT S+ +F ++ RA S GCVRV++   L + +
Sbjct: 399 LLRQDAGPKNPLGQMAIRFPNPFAVYLHDTPSQALFQKAPRAFSSGCVRVEQAMQLRDLL 458

Query: 521 LERFTDRIGKTAADFSGPTPKVVRLNRPLPIHLVYITAWGGEGGKVAFVRDIYAKDRAIR 580
           L    +R        +G T +  RL  P+PI L Y T      G++ +  DIY +D A+ 
Sbjct: 459 LSP-AERQRTNELLATGLTHE-FRLATPVPILLSYWTVQADRQGQLLYAPDIYGRDAALS 516

Query: 581 QAL 583
            AL
Sbjct: 517 AAL 519