Pairwise Alignments

Query, 599 a.a., ErfK/YbiS/YcfS/YnhG (NCBI) from Rhodospirillum rubrum S1H

Subject, 571 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  214 bits (545), Expect = 8e-60
 Identities = 166/514 (32%), Positives = 261/514 (50%), Gaps = 42/514 (8%)

Query: 92  AAARLAKTYRDHHGGKPLWMSGAAASPRGLALIAALEGASEEGIDREAYRLGEIKRLLAR 151
           +A  L++ Y+  H  + LW     A      ++  ++ A EEG+ +E Y   ++  L  +
Sbjct: 61  SAKLLSRVYQVRHY-QALWEDKDYAG----TMLDVIKRADEEGLAKEDYHYPKLVELYQQ 115

Query: 152 TTPADAQTA------DLLMGRAFLLFATDRLLGQSRRAL-----PFSERLALLAREEGVI 200
            + ++ Q        ++L+    + +A   L G+   ++      + E           +
Sbjct: 116 LSASNWQDEYKSSIFEVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDEAHLDFDTTLKQL 175

Query: 201 PEDLLANAGAAPDFGLFLATLAPPTPQYDLLRQGLVRYQALARDGGWP-TDLADGASIKP 259
            E + A+  A    GL     AP    Y  L+Q L  Y+ LA    +P T +     IKP
Sbjct: 176 EEHIKAHTVAEAINGL-----APKITPYHQLKQYLAHYKDLA--ARYPFTTIPYTEVIKP 228

Query: 260 GDRDPRLPEMRRRLAAEGLVVGS----DPTFIGPPDAELLDDFLVEA-VRIFQAAHGLSA 314
           G   P +  +  RL  +G +  +    D T +   +A LL D ++EA +R FQA H L A
Sbjct: 229 GTTSPSIKGIAARLKEQGYLDANATVQDATLVA--NAPLLYDNILEAAIRQFQADHSLKA 286

Query: 315 DGVIGRGTLVDMNTTPAQRITQIRVALERWRLLPRALGQTHLLVNVPQYQLYLNEGRTTV 374
           DGVIG GT+  +N   AQR+ QIR+ LER R L   L   +L+VN+  Y+L L +     
Sbjct: 287 DGVIGAGTMAALNVPYAQRVEQIRINLERARWLSANLSANYLIVNLAGYELLLFKDNNLS 346

Query: 375 LSMRVAVGRQDFETPLFSDTLRYMEFNPYWNVPISIAQAEVIPKQIENSAYLAKKGFTVL 434
               + +G+ D +TPLF   L+Y+  NP W VP SI+  E+I  Q ++  YL KK F V 
Sbjct: 347 WRTDIIIGKIDSKTPLFKSKLKYVVVNPTWTVPNSIS-TEIINHQRKDPDYLHKKHFKV- 404

Query: 435 PRGVEGWDDGVGHESVDWKADAARS--YRLRQDPGPANPLGTVKFMFPNEYAVYLHDTNS 492
              VE     V    +DW +   ++  Y   Q+PG  N LG VKF+FPN+Y++YLHDT S
Sbjct: 405 ---VESSGTPVDASGIDWHSMTRKNFPYWFVQEPGADNSLGLVKFIFPNQYSIYLHDTPS 461

Query: 493 RGVFDRSARAVSHGCVRVQEPALLANYILERFTDRIGKTAAD--FSGPTPKVVRLNRPLP 550
           + +FD++ RA SHGC+RV++P +LA+ +L    +   +T  +    G T  +  L+ PL 
Sbjct: 462 KNLFDKTDRAFSHGCIRVKDPLVLADKLLSANANWSSETLNNKLAEGKTENLF-LDEPLD 520

Query: 551 IHLVYITAWGGEGGKVAFVRDIYAKDRAIRQALH 584
           I ++Y TA   + GK+ F  D+Y +D  + +AL+
Sbjct: 521 ILIMYWTA-TIKNGKIKFYNDVYTRDPVLIEALN 553