Pairwise Alignments

Query, 262 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (500), Expect = 5e-55
 Identities = 111/256 (43%), Positives = 159/256 (62%), Gaps = 16/256 (6%)

Query: 5   PMIEVNNLAVAF-------GDGKRVVRAVRAVSFRVEAGESFGLVGESGSGKSTVLRAVA 57
           P+++V N+ + F          +  V+A   VSF V  GE+FGLVGESGSGKST+ R +A
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 58  GLFDHWTGDIVVNNQAQGAKRDG----AFYRLVQMVFQDPYGSLHPKHTIDRILSEPLAV 113
           GL+    G +        A +         R +QMVFQ+PY S++P+  I  I++EP+  
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420

Query: 114 HRLDQPERRIREV----LDQVQLGASYRFRYPHQLSGGQRQRVAIARALILSPRILLLDE 169
           H+L + E   R++    L+ V LG     +YPH+ SGGQRQR++IARAL   PR+L+ DE
Sbjct: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480

Query: 170 PTSALDVSIQAEILNLLADIGRERAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVELASRD 229
           PTSALDVS+QA+ILNLL D+  E  +T+L +SHDL V+  MCDR+ VM+ G ++E+A  +
Sbjct: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540

Query: 230 DLRAGRLDHPYSRQLL 245
            L      H YS++L+
Sbjct: 541 QLFTDP-QHEYSKKLI 555



 Score =  150 bits (379), Expect = 6e-41
 Identities = 95/261 (36%), Positives = 149/261 (57%), Gaps = 14/261 (5%)

Query: 6   MIEVNNLAVAFGDGKRVVRAVRAVSFRVEAGESFGLVGESGSGKSTVLRAVAGLFDH--- 62
           ++EV NL + +     V  AV++++  ++ GE  G+VGESG+GKSTV  AV  L      
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 63  -WTGDIVVNNQAQGAKRDGAFYRL----VQMVFQDPYGSLHPKHTIDRILSEPLAVHRLD 117
              G++ +N +        A   +    +  +FQDP  SL+P  T++  L+E +  +   
Sbjct: 63  IAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQV 122

Query: 118 QPERRIREVLDQV-QLGA----SYRFRYPHQLSGGQRQRVAIARALILSPRILLLDEPTS 172
             E   +  L  + Q+G     +   +YPHQ SGG RQRV IA AL   P +++ DEPT+
Sbjct: 123 SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTT 182

Query: 173 ALDVSIQAEILNLLADIGRERAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVELASRDDLR 232
           ALDVSIQ +ILNL+ ++ ++  +  +LV+HD+GVV+++ DR+AVM  G++VE      + 
Sbjct: 183 ALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV- 241

Query: 233 AGRLDHPYSRQLLLASRGYDR 253
            G  +HPY+R L+ A    DR
Sbjct: 242 LGTPEHPYTRSLISAVPRSDR 262