Pairwise Alignments

Query, 262 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  184 bits (468), Expect = 3e-51
 Identities = 117/268 (43%), Positives = 159/268 (59%), Gaps = 23/268 (8%)

Query: 1   MTHAPMIEVNNLAVAFGDGKRVVR------AVRAVSFRVEAGESFGLVGESGSGKSTVLR 54
           +T  PMI   ++ V +   K + R      A+  VS  +  GE   LVG SGSGK+T+ R
Sbjct: 269 LTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGR 328

Query: 55  AVAGLFDHWTGDIVVNNQAQGAKRDGAF--YRL-VQMVFQDPYGSLHPKHTIDRILSEPL 111
            +AGL     G I    Q QG  R   +  YRL  QMVFQDPY SL P+ TI+ ++ E L
Sbjct: 329 TIAGLVTESEGRI----QFQGRPRTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEAL 384

Query: 112 A-VHRLDQPERRIR--EVLDQVQLGASYRFRYPHQLSGGQRQRVAIARALILSPRILLLD 168
             V  LD   +R R  E L++V LG  Y  RYPH+LSGGQRQRVAIARA+   PR L+ D
Sbjct: 385 RPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIAD 444

Query: 169 EPTSALDVSIQAEILNLLADIGRERAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVELASR 228
           EP SALDV+++A++L+L +D+ +    + L +SHDLGVV  + DR+ VM++G ++E   R
Sbjct: 445 EPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDR 504

Query: 229 DDLRAGRLDHP---YSRQLLLASRGYDR 253
           D +     D P   Y+R+LL A    D+
Sbjct: 505 DTI----FDSPKEAYTRRLLSAIPALDQ 528



 Score =  140 bits (353), Expect = 6e-38
 Identities = 87/247 (35%), Positives = 131/247 (53%), Gaps = 16/247 (6%)

Query: 24  RAVRAVSFRVEAGESFGLVGESGSGKSTVLRAVAGLFDHWT----GDIVVNNQAQGAKRD 79
           + V++VSF +  GE FG+VGESGSGK+   RA+  L         G +    +     ++
Sbjct: 22  QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKE 81

Query: 80  GAFYRL----VQMVFQDPYGSLHPKHTIDRILSEPLAVHRLDQPERRIREVLDQVQLGA- 134
                L    + +VFQ+P  SL+P  TI R L E L +H     + R   +LD ++    
Sbjct: 82  NELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGI 141

Query: 135 ----SYRFRYPHQLSGGQRQRVAIARALILSPRILLLDEPTSALDVSIQAEILNLLADIG 190
                    YPH+ SGG RQR+ +A  ++L P +L+ DEPT+ALD  IQ +++ L+ ++ 
Sbjct: 142 RDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELT 201

Query: 191 RERAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVELASRDDLRAGRLDHPYSRQLL--LAS 248
           R     +LL+SHDL +VA    R+ VM  G +VE    +DL      HPY+++LL  L  
Sbjct: 202 RAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAP-QHPYTKKLLSSLPF 260

Query: 249 RGYDRAV 255
           RG  R +
Sbjct: 261 RGRPRQI 267