Pairwise Alignments

Query, 262 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  187 bits (475), Expect = 4e-52
 Identities = 109/258 (42%), Positives = 162/258 (62%), Gaps = 16/258 (6%)

Query: 5   PMIEVNN------LAVAFGDGKRVVRAVRAVSFRVEAGESFGLVGESGSGKSTVLRAVAG 58
           P++EV N      L+  F      + AV+ +SF V AGE+ G+VGESGSGKSTV R + G
Sbjct: 279 PILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLG 338

Query: 59  LFDHWTGDIVVNNQ---AQGAKRDGAFYRLVQMVFQDPYGSLHPKHTIDRILSEPLAVHR 115
           L +   G+ + + +       K+  AF R VQMVFQDPY S++P+ T+  I+SEP  +H+
Sbjct: 339 LNEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHK 398

Query: 116 LDQPER-----RIREVLDQVQLGASYRFRYPHQLSGGQRQRVAIARALILSPRILLLDEP 170
            D  E+     R+ E+L  V L   +  RYPHQ SGGQRQR+AIARAL   P +++ DE 
Sbjct: 399 -DILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEA 457

Query: 171 TSALDVSIQAEILNLLADIGRERAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVELASRDD 230
            SALDVS+Q ++++LLA++     +  + ++HDL +V H  DR+ VM++GE+VE A+ ++
Sbjct: 458 VSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEE 517

Query: 231 LRAGRLDHPYSRQLLLAS 248
           +      H Y+RQL+ A+
Sbjct: 518 IFRNP-QHAYTRQLINAT 534



 Score =  164 bits (414), Expect = 5e-45
 Identities = 106/264 (40%), Positives = 150/264 (56%), Gaps = 21/264 (7%)

Query: 1   MTHAPMIEVNNLAVAFGDGKRVVRAVRAVSFRVEAGESFGLVGESGSGKSTVLRAVAGLF 60
           MT   ++EV +L V F       RA   VSF V+AGE+  ++GESGSGKS    A+ GL 
Sbjct: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60

Query: 61  DHWTGDIVVNNQA----------QGAKRDGAFYRLVQMVFQDPYGSLHPKHTIDRILSEP 110
           D   GDI   + A          +G +RD    R + M+FQDP   L+P +TI   L E 
Sbjct: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRD-LNGRRIAMIFQDPLSHLNPVYTIGWQLEEV 119

Query: 111 LAVHRLD---QPERRIREVLDQVQLGASYRF--RYPHQLSGGQRQRVAIARALILSPRIL 165
             VH +    +  +R  E+L +V +    +   +YPHQ SGGQRQR+ I  A+ L P IL
Sbjct: 120 FTVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEIL 179

Query: 166 LLDEPTSALDVSIQAEILNLLADIGRERAMTLLLVSHDLGVVAHMCDRLAVMRNGEVVEL 225
           + DEPT+ALDVS+QA+IL LL  +  E  + +++++HDL V A+M DR+ VM++G +VE 
Sbjct: 180 IADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVE- 238

Query: 226 ASRDDLRA--GRLDHPYSRQLLLA 247
               + RA      H Y+R L+ A
Sbjct: 239 --EGEARAVFENPAHSYTRTLINA 260