Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  206 bits (525), Expect = 7e-58
 Identities = 123/260 (47%), Positives = 166/260 (63%), Gaps = 7/260 (2%)

Query: 3   EPPLIDVDGLNVSFSSDKGTVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGLTPG 61
           E P+ID   + VSF  + GTV AV+DVSF L R E +AIVGESGSGKS T R ++GL   
Sbjct: 22  ERPVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSK 81

Query: 62  KVSARRMSFHDIDLRDL---SARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEAARP 118
           + +    +  + D RD+   S R  R++RG RI M+ Q+P  SLNPV TIG Q++EA R 
Sbjct: 82  RATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRA 141

Query: 119 --LADLKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEVLIAD 176
                 ++A  R++E+L  V+I DPE     +PH+LSGG  QR MIAM L  +P+VLIAD
Sbjct: 142 HRRVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIAD 201

Query: 177 EPTSALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVETLAA 236
           EPT+ALDVTV+ Q+L ++  L ++  M +I I+HDL +VR FSD V +M  G + E    
Sbjct: 202 EPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTT 261

Query: 237 SAL-EEARHPYTRGLLACVP 255
            AL  + +H YTR LL+  P
Sbjct: 262 EALFADPQHAYTRRLLSSEP 281



 Score =  132 bits (333), Expect = 1e-35
 Identities = 94/260 (36%), Positives = 138/260 (53%), Gaps = 16/260 (6%)

Query: 4   PPLIDVDGLNVSFSSDKG--------TVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRA 54
           P L+D   + VSF+  KG         + AV  +S  L R E L +VGESGSGK+  G+A
Sbjct: 293 PILLDGRNVRVSFTLKKGGFFRPEFKELVAVDGLSLNLRRHETLGLVGESGSGKTTFGQA 352

Query: 55  ILGLTPGKVSARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLME 114
           ++ L         + F    + D   +G R +R K I +V QDP  SLNP M++G+ + E
Sbjct: 353 LIRLL--NTDGGEIYFEGEPIHDKDRKGMRPLRSK-IQIVFQDPFSSLNPRMSVGQIIEE 409

Query: 115 A--ARPLADLKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEV 172
                 + + +  RL+ +E    V    P  +   +PHE SGG  QR  IA  +  EPE 
Sbjct: 410 GLIVNGMGENRKDRLKRVEDA-LVSAGMPSNILSRFPHEFSGGQRQRIAIARAVALEPEF 468

Query: 173 LIADEPTSALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVE 232
           ++ DEPTSALD++V+ Q++ +L  L  +R +  + ISHDL +VR    RV++M  G+IVE
Sbjct: 469 ILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDLKVVRALCHRVVVMQDGKIVE 528

Query: 233 TLAAS-ALEEARHPYTRGLL 251
               S  L   +  YT  L+
Sbjct: 529 EGPVSEVLNNPKTAYTERLV 548