Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 333 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  204 bits (518), Expect = 3e-57
 Identities = 116/257 (45%), Positives = 158/257 (61%), Gaps = 6/257 (2%)

Query: 5   PLIDVDGLNVSFSSDKGTVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGLT--PG 61
           PL+DV  L V F+     + AV DVSFTL + E+L +VGESG+GKS TG +IL L   PG
Sbjct: 3   PLLDVSNLTVKFALRDTALTAVNDVSFTLAKGERLGLVGESGAGKSVTGFSILNLVSKPG 62

Query: 62  KVSARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEA--ARPL 119
            ++   + F   DL    A   R IRG RI M+ QDP  +LNPV+T+G Q++E   A   
Sbjct: 63  FIAGGSVLFEGKDLTRADAETLRDIRGNRISMIFQDPMMTLNPVLTVGTQMIETILAHKK 122

Query: 120 ADLKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEVLIADEPT 179
              K A   +++ L  V I  PER    +PHE SGGM QR +IA+ LL  P ++IADEPT
Sbjct: 123 VTRKEAEAIALDKLRKVYIPSPERRLAQYPHEFSGGMRQRIVIAIALLTSPSLIIADEPT 182

Query: 180 SALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVET-LAASA 238
           +ALDVT++ +++ +L +L +  DMGLI I+HDL +V   + ++ +M  G IVE    A  
Sbjct: 183 TALDVTIQAEIMDLLLELCQSEDMGLILITHDLGVVSQVTQKIAVMYAGGIVEMGDTAMV 242

Query: 239 LEEARHPYTRGLLACVP 255
           + E  HPYTRGLL  +P
Sbjct: 243 VGEPLHPYTRGLLGALP 259