Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 672 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein from Marinobacter adhaerens HP15

 Score =  211 bits (537), Expect = 3e-59
 Identities = 124/264 (46%), Positives = 167/264 (63%), Gaps = 11/264 (4%)

Query: 1   MSEPPLIDVDGLNVSFSSDKGTVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGLT 59
           M+   ++D+  L+V   +D  T+HAVR +S  L R E L IVGESGSGKS T  A++ L 
Sbjct: 1   MNMASILDIQDLSVDIPTDSSTLHAVRGISLELNRGETLGIVGESGSGKSMTALALMNLL 60

Query: 60  PGKVSARRMSFHDIDLRDLSARGWRS----IRGKRIGMVMQDPKYSLNPVMTIGEQLMEA 115
           P   + R+ S  D D  DL+    R     IRG+RIGM+ Q+P  SLNPV +IG QL E 
Sbjct: 61  P-PAAKRQASCIDFDGSDLTHATERELASKIRGQRIGMIFQEPMTSLNPVYSIGRQLKET 119

Query: 116 A---RPLADLKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEV 172
               R ++D + A  R++ +LE V + DP    + +PHELSGG  QR MIAM L+ EPE+
Sbjct: 120 MTLHRKVSDTE-AENRAVYLLEKVGLPDPASRLKQYPHELSGGQRQRVMIAMALMNEPEL 178

Query: 173 LIADEPTSALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVE 232
           LIADEPT+ALDVT++ Q+L +L +L ++  M +I I+HDL +V   +D + +M  G IVE
Sbjct: 179 LIADEPTTALDVTIQAQILHLLRELQQEFGMSMILITHDLGVVSRAADNIAVMYAGDIVE 238

Query: 233 T-LAASALEEARHPYTRGLLACVP 255
           T      LE  RHPYT+GLL CVP
Sbjct: 239 TGKTGEVLENPRHPYTKGLLECVP 262



 Score =  142 bits (358), Expect = 2e-38
 Identities = 102/277 (36%), Positives = 151/277 (54%), Gaps = 39/277 (14%)

Query: 6   LIDVDGLNVSFSSDKGT------VHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGL 58
           ++ VD ++ +FS  +G       + A+ DVS TL + E LA+VGESG GK+   R I+GL
Sbjct: 352 ILTVDHVSCTFSVRRGMFGKRKPLQALDDVSLTLKKGEVLALVGESGCGKTTLTRTIMGL 411

Query: 59  ---TPGKVSARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEA 115
              + G V+       ++   D         R + I  + QDP  SLNP  TIGE +   
Sbjct: 412 QAPSTGSVTLNGQRIENLPPMD---------RARMIQPIFQDPYSSLNPRKTIGEII--- 459

Query: 116 ARPL-----ADLKSARLRSMEMLEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEP 170
           A+PL        +    +  +M+E V +  P RVF ++P +LSGG  QRA I   L+  P
Sbjct: 460 AKPLFVHGIGSNQEQHQQVRKMMELVGL--PSRVFNSYPDQLSGGQRQRAAIGRALILNP 517

Query: 171 EVLIADEPTSALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRI 230
           EV+I DEPTSALDV+V+ Q+L +L DL  + D+  +F++H+L++V+  +DRV +M  G I
Sbjct: 518 EVVICDEPTSALDVSVQAQILNLLLDLRDELDLTYLFVTHNLSVVQHMADRVAVMYLGEI 577

Query: 231 VET-LAASALEEARHPYTRGLL---------ACVPDP 257
           VE       + + +HPYT  L+           VPDP
Sbjct: 578 VECGERDQVMSDPKHPYTHALMNSALSISPGESVPDP 614