Pairwise Alignments

Query, 276 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  202 bits (514), Expect = 8e-57
 Identities = 117/258 (45%), Positives = 162/258 (62%), Gaps = 10/258 (3%)

Query: 6   LIDVDGLNVSFSSDKGTVHAVRDVSFTLGR-EKLAIVGESGSGKSQTGRAILGLT--PGK 62
           L+DV  L V F+     + AV DVSFTLGR E+L +VGESG+GKS TG +I+ L   PG 
Sbjct: 4   LLDVQNLTVKFALRDEALTAVNDVSFTLGRGERLGLVGESGAGKSVTGFSIINLISKPGF 63

Query: 63  VSARRMSFHDIDLRDLSARGWRSIRGKRIGMVMQDPKYSLNPVMTIGEQLMEAARPLADL 122
           ++   + F   DL    A   R IRG RI M+ QDP  +LNPV+TIG Q++E    LA  
Sbjct: 64  IAGGSVLFEGNDLVTTDAETLRDIRGNRISMIFQDPMMTLNPVLTIGSQMVETI--LAHQ 121

Query: 123 KSARLRSMEM----LEAVRIRDPERVFRAWPHELSGGMGQRAMIAMMLLPEPEVLIADEP 178
           K +R  + E+    L  V I  PE+  + +PHE SGGM QR +IA+ LL  P ++IADEP
Sbjct: 122 KMSRREAEEIALDKLRKVYIPSPEKRLKQYPHEFSGGMRQRIVIAIALLTSPSLIIADEP 181

Query: 179 TSALDVTVRLQVLAILDDLVRKRDMGLIFISHDLNLVRTFSDRVLIMVGGRIVET-LAAS 237
           T+ALDVT++ +++ +L +L     MGLI I+HDL +V   + ++ +M  GRIVE    A 
Sbjct: 182 TTALDVTIQAEIMDLLLELCESEKMGLILITHDLGVVSQVTQKIAVMYAGRIVEMGETAR 241

Query: 238 ALEEARHPYTRGLLACVP 255
            + + +HPYT+GLLA +P
Sbjct: 242 IVADPQHPYTKGLLAALP 259