Pairwise Alignments

Query, 310 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 311 a.a., dipeptide transport system permease protein DppC from Phaeobacter inhibens DSM 17395

 Score =  375 bits (962), Expect = e-109
 Identities = 190/311 (61%), Positives = 232/311 (74%), Gaps = 5/311 (1%)

Query: 1   MASSPPRAPRPARAPWVLWLLSDSPASRLQARLGRFYSGWLVFIRNPLAVIGLAIFLCLV 60
           M+S  P   +  RA    WLL+D+P SR QARL   Y GWL   +N +A++GL I + L+
Sbjct: 3   MSSQTPAPKQGLRA----WLLTDTPTSRRQARLAALYQGWLSLRQNHMAMVGLGILILLI 58

Query: 61  ILATFAPWIAPHDPLFGTLSERLLP-PSAGHWLGTDQQGRDIWSRIVFGSRTTLMIIFLV 119
            +A  AP IAPHDP    L+ RL P  S GH LGTD  GRDI SR++ G+R TL I+ LV
Sbjct: 59  SIALLAPVIAPHDPYVQNLANRLQPLGSEGHILGTDSLGRDILSRLIHGARITLYIVALV 118

Query: 120 AITAAPVGLLIGTTAGFVGGIVEAALMRLTDAFLAFPKLILALAFAAALGAGLENAVLAI 179
           A+ A   GLL+GT +G+VGG  +  LMR+TD FLAFP+L+LALAF AALGAG+ENAVLAI
Sbjct: 119 AMIAPIAGLLVGTVSGYVGGWADIILMRITDIFLAFPRLVLALAFVAALGAGIENAVLAI 178

Query: 180 ALTAWPPYARIARAETLAVRRTDFVAAARMCGSSPLRILIGQIMPMCIPSLVVRVSLDMA 239
           +LTAWPPYAR+ARAETL +R +D+++A R+ G+ PLRI+I  I P+C+ SL+VRV+LDMA
Sbjct: 179 SLTAWPPYARMARAETLTIRSSDYISAIRLQGAGPLRIIIKHIWPLCVSSLIVRVTLDMA 238

Query: 240 GVILIAAGLGFLGLGVAPPQPEWGAMVSEGRSQILAQWWVCTYPGIAICIVSLGFNLLGD 299
           G+IL AAGLGFLGLG  PP PEWGAM+SEGR  IL  WWV T PG+AI  VSL FNLLGD
Sbjct: 239 GIILAAAGLGFLGLGAQPPSPEWGAMISEGRRFILDHWWVATMPGLAIFAVSLAFNLLGD 298

Query: 300 GLRDVLDPKRS 310
           GLRDVLDPK S
Sbjct: 299 GLRDVLDPKDS 309