Pairwise Alignments

Query, 333 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 345 a.a., Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  362 bits (928), Expect = e-104
 Identities = 176/324 (54%), Positives = 234/324 (72%)

Query: 10  ATATTLFGLLFVTFLISRMLPADPVLAVVGDHASQALVDRTRIELGLDKPLLVQFGLYIG 69
           + A TL GLL +TF I R++P DPVLA+VG  A  +   +   ELGLDKPL  QF +Y+G
Sbjct: 22  SVAVTLLGLLLLTFFIGRVMPLDPVLAIVGPDADASAYAQVYKELGLDKPLWTQFAIYLG 81

Query: 70  NVLQGDLGQSVRTGEPIASELARVFPATLELATLGTLIGVLAGVPLGILAALRKDTLIDH 129
           ++L GD G ++ TG P+ +++ARVFPATLELATL  L GVLAG+PLG+ AA  +    DH
Sbjct: 82  DLLHGDFGMALLTGNPVITDIARVFPATLELATLAILFGVLAGLPLGVYAATHQGRAGDH 141

Query: 130 LVRFIGLMGYSFPIFWLGLMGLLVFYATLGVLPGPGRLDFGYEDFVTPITGLMTIDTLLA 189
           + R I L GYS PIFW+G+M  LVFYA LG   G GR+   Y+  +   TGL+ IDT  +
Sbjct: 142 VARLITLFGYSTPIFWIGMMAFLVFYAWLGWAGGVGRIGLAYDGLIPKHTGLLLIDTAWS 201

Query: 190 GDMDLFRNALAHLILPAGLLGYYSLAYISRMTRSLMLGELRQEYIITARVKGVSETKIVW 249
           GD + FR+AL H++LPA +L + S+AYISRMTRS ML +L QEYIITARVKG+S+ +IVW
Sbjct: 202 GDWEAFRSALRHILLPAVILSFNSVAYISRMTRSFMLEQLSQEYIITARVKGLSQRRIVW 261

Query: 250 KHALGNIKVPLITVVALSYAGLLEGSVLTETVFSWRGLGLYITDSIFGQDMPAVMGGTIV 309
            HA GNI+V L+T+VAL+Y GLLEG+VL ETVF+W G G Y+T S+   DM AVM   ++
Sbjct: 262 GHAFGNIRVQLLTIVALAYGGLLEGAVLIETVFAWPGFGQYLTSSLLLGDMNAVMACVLL 321

Query: 310 VGVIFIVINMLTDVAYRFLDPRSR 333
           +G+IF+ +N+++D  Y+  DPR+R
Sbjct: 322 IGLIFVTLNLISDALYKIFDPRTR 345