Pairwise Alignments

Query, 501 a.a., Multi-sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 1029 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  146 bits (369), Expect = 3e-39
 Identities = 116/327 (35%), Positives = 154/327 (47%), Gaps = 30/327 (9%)

Query: 155  MIHPEDRPATLAAFHDHLAGKTP-SYHARYRWKLPDGVMIWVEAKGRVVTRDRSGKPLRM 213
            + H ED      A+ +  AG  P     R R +   G + WV        R   GK  R 
Sbjct: 713  LAHAEDVANLQQAWREAEAGTAPFDIKCRIRHR---GELRWVHLTAEF-ERTPEGKAERA 768

Query: 214  TGTLSDATPQVEAEELMR-----------EKSRRLEESNRDLEQFAYVASHDLQEPLRMV 262
             G   D T +V AEE +R           E++  L  +N +LE FAY  SHDL+ PLR +
Sbjct: 769  AGVARDITREVAAEEQIRQFNDSLERRVKERTAELAAANHELEGFAYAVSHDLRAPLRAI 828

Query: 263  SSYLGLLRRRHGDQLAPEALEFMSYAEDGAKRMSRLILDLLEYSRVTT---RGEPPETVA 319
            + +   L   +GD+L  EA EF+     G + +  LI  LL  SR T    R EP +  A
Sbjct: 829  TGFSQALLEDYGDKLEGEAREFLDEIIRGGRHLGELIDGLLTLSRCTRGELRREPVDISA 888

Query: 320  LAEVID-EARSNLR--MIIDETAARIDLLGCDRTVLADRGQVVRVFQNLIGNALKYRSPD 376
            LAE +  E RS+ R      E    I + G       D   +  V +NL+ NA KY +  
Sbjct: 889  LAEAMAREIRSHQRGAHFTLEVEPGIQVHG-------DPAMLEVVMRNLMENAWKYSAHQ 941

Query: 377  RPPIITLRCGE-DEGWVNVSVADNGIGFSPEHAERIFIIFQRLHGPKAYEGTGIGLSICK 435
            + P I +         V   VADNG GF   +A ++F  FQRLH    + GTGIGL+  +
Sbjct: 942  KAPHIRVYADSITADTVAWCVADNGAGFDMNYANKLFKPFQRLHRQSEFAGTGIGLATVQ 1001

Query: 436  RIIERHGGTIEAQGTPGEGALFRFTLP 462
            RII RHGG I A     +GA+FR TLP
Sbjct: 1002 RIIHRHGGDITASSAVNQGAVFRITLP 1028



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%)

Query: 152 WETMIHPEDRPATLAAFHDHLAGKTPSYHARYRWKLPDGVMIWVEAKGRVVTRDRSGKPL 211
           W   IHPED+    AA+   +A +  +     R +  DG   W + +   + +DR GK +
Sbjct: 585 WMAQIHPEDQGRLNAAWESCIA-RGENLRIDLRIRRHDGQYRWFDTRASAL-KDREGKLI 642

Query: 212 RMTGTLSDATPQVEAEELMR-EKSRRLEESNRDLEQFAYVASHDLQEPLRMVSSYLGLLR 270
           R  G+ +D   QVE E +    ++RR+    + L  FA  A+ DL++    +  +  ++ 
Sbjct: 643 RWIGSNTDV--QVEREMMAALSEARRIISQGQRLGHFASWAA-DLKQGRWFIPDFTPIVD 699

Query: 271 RRHGDQLAPEALEFMSYAEDGA 292
              G+    + L+ +++AED A
Sbjct: 700 WPPGEYNCAQLLQ-LAHAEDVA 720