Pairwise Alignments

Query, 138 a.a., RNA polymerase, omega subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

 Score = 63.2 bits (152), Expect = 1e-15
 Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 3/80 (3%)

Query: 1  MARVTVEDCVLKIPNRFELVLVAGQRARDI-SAGSALTVDRDNDKNPVVSLREIADG--T 57
          MARVTV+D V KI NRF+LVLVA +RAR + S G    V  +NDK  V++LREI +G  T
Sbjct: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60

Query: 58 VDIPNLKEAVIQGLQKHVEI 77
           D+ + +E   Q  Q+  E+
Sbjct: 61 KDVLDARERQEQQEQEAAEL 80