Pairwise Alignments

Query, 138 a.a., RNA polymerase, omega subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 135 a.a., DNA-directed RNA polymerase subunit omega from Sinorhizobium meliloti 1021

 Score =  117 bits (294), Expect = 5e-32
 Identities = 65/110 (59%), Positives = 80/110 (72%), Gaps = 3/110 (2%)

Query: 1   MARVTVEDCVLKIPNRFELVLVAGQRARDISAGSALTVDRDNDKNPVVSLREIADGTVDI 60
           MARVTVEDC+ K+ NRFELVL+A  RAR +S G+ +TVDRDNDKNPVV+LREIAD T+  
Sbjct: 1   MARVTVEDCIDKVENRFELVLLASHRARLVSQGAPITVDRDNDKNPVVALREIADETLSP 60

Query: 61  PNLKEAVIQGLQKHVEIDEPEEDDFDAMGLDRDLMPGVA-LAEDDDTLEA 109
            +LKE +I  LQKHVE+DEPE D   A  +  +  P  A  AE++D  EA
Sbjct: 61  GDLKEDLIHSLQKHVEVDEPEPD--PASLVQTEAAPAFAEAAEEEDQPEA 108