Pairwise Alignments

Query, 221 a.a., Ribonuclease III (NCBI) from Rhodospirillum rubrum S1H

Subject, 229 a.a., ribonuclease III from Methanococcus maripaludis S2

 Score = 76.6 bits (187), Expect = 3e-19
 Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 9/225 (4%)

Query: 3   RDLNALQIALDHRFTDPALLARALTHRS------REGRPSYERLEFLGDRVLGLVVAEML 56
           ++   L   LD +F D  +  RA  H S             ERLE+LGD VL L+++E L
Sbjct: 2   KNFEKLLSKLDIQFNDLNIFKRAFMHSSYVNEQKNTNLEDNERLEYLGDAVLDLIISEYL 61

Query: 57  YARFPTEDEGALARRHASLVRQDTVARVAQSVGLGELMELSRGEEELGGQFNPSLLCDVC 116
           + +     EG +++  A  V +  +   A+ +     + L +GE    G   P+++ DV 
Sbjct: 62  FKK-ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYVLLGKGEINSKGYNKPAIVSDVF 120

Query: 117 EAVLGALHLDGGYAKAQRFVEARWAPLMAEDLTPP-KDAKTALQEWAQGRGLPLPTYAVE 175
           EA + A++LD G    ++FV     P++ E       D KT LQE+ +     +  Y   
Sbjct: 121 EAFIAAIYLDQGLDSVKKFVYEFIIPIIEESSKELFIDYKTKLQEFPELINKSI-NYVNL 179

Query: 176 GRDGPPHKPMFTVSVTVKDNGSESALGASKRLAEQAAAQRLLDRL 220
              G  H   F ++V          +G SK+ AE  AA+  L +L
Sbjct: 180 EETGEAHDKKFVIAVKSGRKILGKGIGKSKKEAEMKAAKNALLKL 224