Pairwise Alignments

Query, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

Subject, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (499), Expect = 6e-55
 Identities = 105/327 (32%), Positives = 167/327 (51%), Gaps = 4/327 (1%)

Query: 35  LTMVTTWPKDYVGLGESASRLAARVRTMSGGRLSITVYAAGELVPAFEAFEAVANGTADL 94
           LT+  TW  ++   G++   +AA    MS GRL I + +A +       F+ V +G  D+
Sbjct: 47  LTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDM 106

Query: 95  YHGAETYWESRSSAFNFFCAVPFGLTAIETSAWIHHGGAQALWDALSAPYGIKPMLASAT 154
            H A  YW+ +     +F ++PFG+T  E  AW +HGG   L + + +P+ +       T
Sbjct: 107 GHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNT 166

Query: 155 GVQMGGWFNKEIKRVEDFKGLRMRIPGLGARILKEVGAVPVALPGSQIHDALRDGAIDAA 214
            VQMGGWF KEI  VED +GL+MRIPG    +L E+GA P  +   +++ +L    IDA 
Sbjct: 167 DVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKPTNIAPGELYTSLERRTIDAL 226

Query: 215 EWIGPWSDLALDLQKVARYYYYPGFHEPGTSLAVGINLGVWRGLSDQERAIIEAACGAEH 274
           EW+GP  DL +   K+A  YYY G+HEP T L   +N   W  L +  R I+  A     
Sbjct: 227 EWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTA- 284

Query: 275 AFSLAEYNARNGDALHTLVTNH--GVQLRAFPTQVLLELGKTAGRVVRAAAADSPETRRI 332
           A+ +   +          +T     V+++ FP  V+  L +   R++   AA+ P  + I
Sbjct: 285 AYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALREVNDRLLAKHAAEDPLAKEI 344

Query: 333 YDHYTAFRRKALTWAQLSDQAFWNARS 359
            +    + ++  +W  +S +A+ N+ S
Sbjct: 345 QESQANYLKQTRSWTDISLRAYLNSES 371