Pairwise Alignments

Query, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

Subject, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  190 bits (483), Expect = 4e-53
 Identities = 106/326 (32%), Positives = 168/326 (51%), Gaps = 8/326 (2%)

Query: 35  LTMVTTWPKDYVGLGESASRLAARVRTMSGGRLSITVYAAGELVPAFEAFEAVANGTADL 94
           LT+  TW  +   LG++   +A     MS GR+ I + +A +       F+ V +G  DL
Sbjct: 35  LTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDL 94

Query: 95  YHGAETYWESRSSAFNFFCAVPFGLTAIETSAWIHHGGAQALWDALSAPYGIKPMLASAT 154
            H +  YW+ +     FF ++PFG+ A E  AW ++GG   L + + AP+ +       +
Sbjct: 95  GHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNS 154

Query: 155 GVQMGGWFNKEIKRVEDFKGLRMRIPGLGARILKEVGAVPVALPGSQIHDALRDGAIDAA 214
            +QMGGWF KEI  V+D +GL+MRIPG    +L ++GA P  +   +++ +L  G IDA 
Sbjct: 155 DIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDAL 214

Query: 215 EWIGPWSDLALDLQKVARYYYYPGFHEPGTSLAVGINLGVWRGLSDQERAIIEAACGAEH 274
           EW+GP  DL +   K+A  YYY  +HEPG+     +N   W  L    + I+E A     
Sbjct: 215 EWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVA- 272

Query: 275 AFSL----AEYNARNGDALHTLVTNHGVQLRAFPTQVLLELGKTAGRVVRAAAADSPETR 330
           AF +     + NA +  A+ +   +  +++R FP  VL  L +    +++  AA  P  +
Sbjct: 273 AFDMYNQAIDANATSWAAMKSEYPD--IKVRDFPPAVLAALRQANNELLQEQAASDPLAK 330

Query: 331 RIYDHYTAFRRKALTWAQLSDQAFWN 356
            I D   A+  K   W ++S QA+ N
Sbjct: 331 EIIDSQQAYLTKVRDWTRISTQAYLN 356