Pairwise Alignments

Query, 364 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 22/272 (8%)

Query: 3   RREFLSASAAAATGGLSLDGLSRPALANGAKTLTMVTTWPKDYVGLGESASRLAARVRTM 62
           RR FL   AA A   L+   L R   A   +TL +    P  +     +A ++   ++  
Sbjct: 5   RRTFLGGVAAGAALSLATPSLVR---AQETRTLRLGIVTPPGHPW-NNAALKVGEALKAE 60

Query: 63  SGGRLSITVYAAGELVPAFEAFEAVANGTADLYHGAETYWESRSSAFNFFCAVPFGLTAI 122
           + GRLSI+V+ AG+L       + + +G  DL         SR  A     A     +  
Sbjct: 61  TNGRLSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTA 120

Query: 123 ETSAWIHHGGAQALWDALSAPYGIKPMLASATGVQMGGWFNKEIKRVEDFKGLRMRIPGL 182
           + +  +    A  L D L A  G   +    T +++  +  KEI  ++D  G+++RI   
Sbjct: 121 KVAKLVREPVAMKLLDVLPAETGTVGLAWGITTMRV-VFSAKEIAGLDDINGMKLRINTT 179

Query: 183 GA--RILKEVGAVPVALPGSQIHDALRDGAIDAAE------WIGPWSDLALDLQKVARYY 234
            A     + +GA P  +P   + DA+ +G +D  E      W   +  ++  + K+   +
Sbjct: 180 PAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKMNAIF 239

Query: 235 YYPGFHEPGTSLAVGINLGVWRGLSDQERAII 266
                  P  +LA G    VW+ L + +R II
Sbjct: 240 M------PCVALASG---RVWQTLPEADREII 262