Pairwise Alignments

Query, 360 a.a., OmpA/MotB (NCBI) from Rhodospirillum rubrum S1H

Subject, 298 a.a., chemotaxis motB protein from Caulobacter crescentus NA1000

 Score =  261 bits (667), Expect = 2e-74
 Identities = 145/324 (44%), Positives = 198/324 (61%), Gaps = 32/324 (9%)

Query: 2   ADQPIIIKRIKKGG-HAHHGGAWKLAYADFVTAMMAFFLLLWLLNSVTEEQLVGISNYFA 60
           ++QPIIIK++KKGG H HHGGAWK+AYADFVTAMMAFFLL+WLLN+ + EQ  GI++YFA
Sbjct: 5   SEQPIIIKKVKKGGGHGHHGGAWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQGIADYFA 64

Query: 61  PTAVSQSPSGAGGVLGGQVLGEGASQSNSSSPAVQLTLPPPTIGAGGQDFSDANEGVDAS 120
           P ++S + SG+GG+LGG  LG+  ++++     VQ   P                  +A 
Sbjct: 65  PASISSTTSGSGGILGGTSLGDDGAKADGKLSVVQQMAP------------------EAQ 106

Query: 121 DSDDDAGKGEGKGASAGDLEGLGKLGVEPTDKQLAAAEEKRQQEEFNKTATELRQAIQAV 180
           D   +A   E     +             +++ L  A  K++Q+ F   A  LRQ++Q +
Sbjct: 107 DVTKEAQSSETANLDSA------------SEQALRDALAKKEQDSFASAAQSLRQSLQDM 154

Query: 181 PSLQALSNSLLIDNTPEGLRIQLIDREGLSMFPTGSSALLPHTRDLLALVAKAVADVPNK 240
           P L  LS  +LID TPEGLRIQL+D+EG SMF   S       R LL  VAK +  +PN+
Sbjct: 155 PELAELSKQILIDQTPEGLRIQLVDQEGRSMFKENSREPNDRARVLLRAVAKVINQLPNR 214

Query: 241 ISISGHTDAPPYSDPSGYGNWELSADRALASRRVLLANGLKEDRVDRVVGKAETEPLLAD 300
           ++ISGHT A  +      G+W LSA RA ASR+VL + G+ +DRV +V GKA +EPL AD
Sbjct: 215 VTISGHTSANAFGKKQD-GDWALSAQRADASRQVLRSAGVDDDRVYQVSGKANSEPLYAD 273

Query: 301 DPKAPSNRRIAITLLRDRSLYAEG 324
           DP    NRRI+I LLR++ +  +G
Sbjct: 274 DPTLAGNRRISIVLLREKPVLPDG 297