Pairwise Alignments

Query, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 368 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  317 bits (812), Expect = 3e-91
 Identities = 162/365 (44%), Positives = 240/365 (65%), Gaps = 1/365 (0%)

Query: 6   RLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWE 65
           RL  LI KE  ++LR+P+ R ILI+P +LQ+ +F +A TLEV NA I + N+D+G    E
Sbjct: 4   RLWTLIRKELQSLLREPQTRTILILPVVLQVILFPFAATLEVTNATIAIYNQDNGSHSVE 63

Query: 66  LVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDG 125
           L QR         +L+   P +++  +D Q+ L  +     FSR++ + +PA +QI+LDG
Sbjct: 64  LTQRFAHAKAFSHLLLLKSPQEIQPTLDKQKALLLIRFPADFSRNLASNQPAKLQIILDG 123

Query: 126 RRSNAAQIVAGYLNQIVADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQWAMVPGLVAI 185
           R SN+AQI A YL QIV +   E   G+     +  VI R+W+NPNL  +W +VP L+A+
Sbjct: 124 RNSNSAQIAANYLQQIVKNYQLELMTGQPKSNNSELVI-RNWYNPNLNYKWFVVPSLIAM 182

Query: 186 IALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAFLVVSI 245
           I  +  ++VT+LS+ARERE GT DQL+VSPL T +I  GK +P  ++ +A  T  L V I
Sbjct: 183 ITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPAQIVAIAQATIVLGVGI 242

Query: 246 FVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLSGFA 305
           + ++IPF GS+ + Y + ++Y  ++VG GL ISALS TQQQA +G F+ M+P +LLSG+ 
Sbjct: 243 WGYQIPFSGSVLLFYFTMLIYGLSLVGFGLLISALSSTQQQAFIGVFVFMMPAILLSGYV 302

Query: 306 SPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAAAWL 365
           SP++NMP WLQ LT ++P+R++  I K ++LKD +L  V  ++ PL  IA +T  AA W+
Sbjct: 303 SPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWGSLWPLLVIAAITGSAAYWM 362

Query: 366 FRRRM 370
           FRR++
Sbjct: 363 FRRKV 367