Pairwise Alignments

Query, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 379 a.a., ABC-type multidrug transport system, permease component from Sphingomonas koreensis DSMZ 15582

 Score =  161 bits (407), Expect = 3e-44
 Identities = 104/361 (28%), Positives = 191/361 (52%), Gaps = 15/361 (4%)

Query: 6   RLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWE 65
           R+ A++VKE   + RDP    +++  PL+QL +F +A   + ++    L   D       
Sbjct: 11  RIWAVLVKEVHQLRRDPLTFGMVVGLPLVQLILFGFAINNDPRHLRAALEMNDHSSITRT 70

Query: 66  LVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLD- 124
           +   L  +     + ++  P +  A +    V   + +   F+RD+  G    + +L D 
Sbjct: 71  VENSLRASSYFELVPVS-KPGEGEAMLRRGSVQFLIVVPSNFTRDLVRGERPQLLVLADA 129

Query: 125 ------GRRSNAAQ--IVAGYLNQIVADLAAETPRGRRTEAKAPTVIARSWFNPNLLSQW 176
                 G  + A +  +++G  + ++  L A       T +    VI R  +NP  ++  
Sbjct: 130 TDPAATGNATFAVEQAVLSGLRHDLIGPLTARAG----TPSPVEVVIQRR-YNPEGITSH 184

Query: 177 AMVPGLVAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAH 236
            +VPGL+A++  +T +++T++++ARERE GT + L+  PLR  E++ GK++P +LIG A 
Sbjct: 185 NIVPGLLAVVLSMTMVMMTSIAVARERERGTMENLLAMPLRPMEVMTGKILPYVLIGAAQ 244

Query: 237 ITAFLVVSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMV 296
               +V++  +F +PF G+ ++L  +++V++   + LG  +S  + TQ QA+  +F  ++
Sbjct: 245 TVIIVVLAGLIFHVPFAGAAWLLALATLVFITVSLLLGFTLSTFAKTQMQAMQMSFFYIL 304

Query: 297 PMVLLSGFASPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAV 356
           P +LLSGFA P   MP W Q L  L P+ +YL +V+G+ LK     E +  ++ LAA+  
Sbjct: 305 PSILLSGFAFPYAGMPRWAQWLGELLPVTHYLRVVRGVMLKGWYPGEALTQLLILAALGA 364

Query: 357 V 357
           V
Sbjct: 365 V 365