Pairwise Alignments

Query, 371 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 371 a.a., ABC-type multidrug transport system, permease component from Sphingomonas koreensis DSMZ 15582

 Score =  338 bits (866), Expect = 2e-97
 Identities = 178/367 (48%), Positives = 250/367 (68%), Gaps = 4/367 (1%)

Query: 6   RLKALIVKEFLAILRDPKGRMILIVPPLLQLFVFSYATTLEVKNADIILLNRDSGGWGWE 65
           RL+ LIVKE  A+ RDP    +LI+P +LQ+ +F +A TL+V++A I +LN+D G    E
Sbjct: 4   RLRTLIVKELQALTRDPAAVRLLIMPVILQVILFPFAATLDVRDASIGILNQDGGKASTE 63

Query: 66  LVQRLDGTPTIGRILITGDPAQVRAAIDGQRVLAAVEIGPAFSRDIEAGRPATVQILLDG 125
           +VQR+      G + I     ++R A++ Q+VL AV   P+FSRD+  G  A+VQ++ DG
Sbjct: 64  IVQRIAAAEAFGEVRILTSDDELRDALNRQQVLLAVRFLPSFSRDLARGDAASVQVIGDG 123

Query: 126 RRSNAAQIVAGYLNQIVADLAAET---PRGRRTEAKAPTVIARSWFNPNLLSQWAMVPGL 182
           RRSN+AQ+  GY++QIV    AE    PR R +   A  V+ R+W+NPNL  +W++V  L
Sbjct: 124 RRSNSAQLAQGYVDQIVRGYGAEISGDPRSRGSFGSAE-VVTRNWYNPNLEGRWSIVTSL 182

Query: 183 VAIIALLTGLVVTALSIAREREFGTFDQLMVSPLRTHEILAGKMIPPILIGLAHITAFLV 242
           VAI+  L  L+ TALS+ARERE GT DQ++VSPL    I+ GK IP ++IG    T  ++
Sbjct: 183 VAIMTTLGVLITTALSVAREREQGTLDQILVSPLSPALIMLGKTIPAVMIGTFQATIIVL 242

Query: 243 VSIFVFEIPFRGSLFVLYGSSVVYLAAVVGLGLFISALSMTQQQAILGAFMLMVPMVLLS 302
           V+IF+F +PF GSL VLY   ++Y  A+ G GLFISA+S TQQQA LG F  M+P +LLS
Sbjct: 243 VAIFIFGVPFTGSLLVLYTGMLLYALALCGFGLFISAISETQQQAFLGVFTFMMPAILLS 302

Query: 303 GFASPIDNMPEWLQPLTRLDPLRYYLVIVKGLFLKDLALTEVIANVVPLAAIAVVTLGAA 362
           GF +P+ NMP WLQ ++ +DPLR+++VIVKG+FLK     E+ +++ P+A IAV TLG A
Sbjct: 303 GFIAPVANMPLWLQWVSWIDPLRHFIVIVKGVFLKGSGFVEIWSSLWPIAVIAVGTLGTA 362

Query: 363 AWLFRRR 369
            ++FRRR
Sbjct: 363 YFIFRRR 369