Pairwise Alignments

Query, 266 a.a., exodeoxyribonuclease III xth (NCBI) from Rhodospirillum rubrum S1H

Subject, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (367), Expect = 7e-40
 Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 22/277 (7%)

Query: 2   VSIATFNVNSVKARLPNLLDWLGTRSPDVALLQEIKCLDEAFPRAEIEALGYRLAVHGQK 61
           + + +FN+N ++ARL  L   +    PDV  LQEIK  DEAFPR E+EA+GY++  HGQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 62  AYNGVAILSRLPLSEVTARLPGLDGAPAEDDD-QARYLEAVV----DGRFRVCCLYLPNG 116
           A+ GVAIL +    EV      + G P ++++ Q R + A        +  +   Y P G
Sbjct: 61  AHYGVAILCKQTPVEV------IKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQG 114

Query: 117 NPVEEDRKFGYKLAWMDRLIVRATHLMRDFPDTP-VILGGDFNVCPDDLDV----YDPAG 171
           + VE + KF YK  +   L+   T+L     ++  +++ GD N+ P DLD+     +   
Sbjct: 115 DNVEHETKFPYKRQFYRDLM---TYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKR 171

Query: 172 WANDALC--RPETRQRFRALVFLGYTDALRALNPG-APLFTFWDYQAGAWQKDHGLRIDH 228
           W     C  +PE R+  + L+  G  D  R L+P  +  F+++DY++  ++ + GLRID 
Sbjct: 172 WLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDV 231

Query: 229 LLLNPAAADRLSAAGVDRATRGHAKSSDHAPSWVTLE 265
           +L  P  A+    AG+D   R   K SDHAP W T +
Sbjct: 232 ILATPTLAETCQEAGIDYELRAIDKPSDHAPIWTTFK 268