Pairwise Alignments

Query, 270 a.a., chromosome segregation and condensation protein ScpA (NCBI) from Rhodospirillum rubrum S1H

Subject, 262 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  108 bits (271), Expect = 9e-29
 Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 26  LDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYLAFVARARQIHLELAGDYLVMAAWLA 85
           L+ FEGP+D+LL L R QK+D+  L I ++  QYL ++A   Q  +ELA DYLVMAA LA
Sbjct: 36  LESFEGPLDLLLYLIRKQKLDVVDLPISQITAQYLEYIAMLTQARIELASDYLVMAATLA 95

Query: 86  YLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEAMQRAGTTLMARPRLGRDVF-ARGAP 144
            +KSRLL+P    E E   ED  A L   L+  E ++ A   +   PRL RDVF A  AP
Sbjct: 96  EIKSRLLLPRMVAEDEVE-EDPRAQLIRQLKAYEVIKEASQKIDDLPRLERDVFQATAAP 154

Query: 145 EGVAMVTRTAYQAGLYDLLRAYGKVRLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLA 204
                         L+++ RA+G V   ++      ++   L S    + +I A+L    
Sbjct: 155 SPNIKPLVIPPDVSLFEIARAFGDVLKRIDAYEDHHVKREQL-STRERMSQILAMLNS-E 212

Query: 205 DWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQ 247
           D+TP        +E+    R+ V  TF+A +EL K+ +++L Q
Sbjct: 213 DFTPFERLF--SVEE---GRAGVVVTFLALMELVKELLVELYQ 250