Pairwise Alignments

Query, 270 a.a., chromosome segregation and condensation protein ScpA (NCBI) from Rhodospirillum rubrum S1H

Subject, 262 a.a., condensin subunit ScpA (RefSeq) from Shewanella sp. ANA-3

 Score =  107 bits (267), Expect = 3e-28
 Identities = 80/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)

Query: 26  LDGFEGPIDVLLTLARSQKVDLTKLSILRLAEQYLAFVARARQIHLELAGDYLVMAAWLA 85
           L+ FEGP+D+LL L R QK+D+  L I ++  QYL ++A   Q  +ELA DYLVMAA LA
Sbjct: 36  LESFEGPLDLLLYLIRKQKLDVVDLPISQITAQYLEYIAMLTQARIELASDYLVMAATLA 95

Query: 86  YLKSRLLIPAPKNEQEPSGEDMAAALQFHLRRLEAMQRAGTTLMARPRLGRDVF-ARGAP 144
            +KSRLL+P    E E   ED  A L   L+  E ++ A   +   PRL RDVF A  AP
Sbjct: 96  EIKSRLLLPRMVAEDEVE-EDPRAQLIRQLKAYEVIKEASQKIDDLPRLERDVFQATAAP 154

Query: 145 EGVAMVTRTAYQAGLYDLLRAYGKVRLSLEPPPVLAIEAFTLYSVENAIRRIGALLGGLA 204
                         L+++ RA+G+V   ++      ++   L S    + +I A+L    
Sbjct: 155 SPNIKPLVIPPDVSLFEIARAFGEVLRRIDANEDHHVKREQL-STRERMSQILAMLNS-E 212

Query: 205 DWTPIRNFLPPGLEDPLVRRSAVAATFVATLELAKQGVLDLRQ 247
            +TP        +E+    R+ V  TF+A +EL K+ +++L Q
Sbjct: 213 TFTPFERLF--SVEE---GRAGVVVTFLALMELVKELLVELYQ 250