Pairwise Alignments

Query, 351 a.a., SecF protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (507), Expect = 6e-56
 Identities = 115/285 (40%), Positives = 160/285 (56%), Gaps = 3/285 (1%)

Query: 5   FARLTADFHYDFLVSRARVMAASAALLLVCLLALGLRGLDLGIDFTGGLVVEARTATAMD 64
           F  L AD   DF+       A S  ++   +  L  + L+ G+DFTGG ++E       +
Sbjct: 2   FQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPAN 61

Query: 65  PVDLRQSLRASVVGEVDVTTYGEDGRSVTVRVGRQT--GGDQAMLQALEGVKTALGEGAT 122
              +R +L A   G+  V  +G   R V VR+  +    G+    Q L  +K   G    
Sbjct: 62  LEQIRSALEAKGFGDATVQNFGS-ARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVE 120

Query: 123 YRRTNLVGPTVGGEATIAGLLTVALALVLIAAYVWLRFDWHYALGVVLALSHDVVAVLGL 182
            RR   VGP VG E T AG L + ++L+ I  YV +RF+W  A G VLAL+HDV+  LG+
Sbjct: 121 MRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGI 180

Query: 183 YALFQIPFDLTSIAALLTVACYSINDTVVIFDRVREELALTPDAPLATVVNKSINRTLAR 242
           +++ QI  DLT +AALLTV  YS+NDT+V+FDR+RE          A ++N SI +TL+R
Sbjct: 181 FSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR 240

Query: 243 TIVLSGSTLVTMACLALLGGPQLRGFALALIWGTVVGTLSSIYVA 287
           T++ SG+TL  +  L   GG  + GFALAL+ G  VGT SSIYVA
Sbjct: 241 TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVA 285