Pairwise Alignments

Query, 452 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 418 a.a., ABC-type branched-chain amino acid transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  426 bits (1095), Expect = e-124
 Identities = 226/419 (53%), Positives = 295/419 (70%), Gaps = 23/419 (5%)

Query: 28  IKESLITAALAAVLFLPFIALHATSSGAGLFIEQRWETWGWSVLTVFI---GRIALVIWR 84
           ++ +  +A L   + +P   L  T+ G       R E  G  + T +I     +A+ +W+
Sbjct: 5   LRTAFFSALLVIAVAVPVFGLKLTTVGI------RVEVHGAEIGTFWIIAACAVAMFVWQ 58

Query: 85  DNPSNRLHDAL-------LKSVVMPVGGFFR--RNMAFIGLAALVLAIVFPITPFSNRYY 135
                R H A        L +V    G F        +I LA +++A+V+P   + +R  
Sbjct: 59  ---LFRTHLAAGWAASPSLPTVPAGAGNFLTLPSTQRWIILALVLVALVWPF--YGSRGA 113

Query: 136 VDVATTWMIYIMLGWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSQTFGWSFWVCLPLA 195
           VD+AT  +IY+MLG GLNIVVGLAGLLDLGYV FYAVGAY+YALLS  +G  FW  LP+A
Sbjct: 114 VDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYTYALLSHYYGVGFWTALPIA 173

Query: 196 GVFAAFFGVVLGFPVLRLRGDYLAIVTLGFGEIIRVVLLNWYAVTNGPDGISGIERPSFF 255
           G  AA FG +LGFPVLRLRGDYLAIVTLGFGEIIR++L N  +VT GP+GISGI++P+ F
Sbjct: 174 GAMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRILLRNMTSVTGGPNGISGIDKPTLF 233

Query: 256 GLDFARTAPEGGETFHQFFGISYSPDHRVIFLFYLILALAVLTNIFTGRIRRLPVGRAWE 315
           GL F R A EG +TFH++FG++Y+  ++VIFL+ + L L +LT     R+ R+P+GRAWE
Sbjct: 234 GLSFDRRAAEGMQTFHEYFGVAYNSVNKVIFLYLIALLLVLLTLFVINRLLRMPIGRAWE 293

Query: 316 ALREDEIACRSLGINPTNVKLSAFALGAMFGGFAGSFFATRQGFISPESFTFMESAVILA 375
           ALREDEIACR+LG+NPT +KLSAF LGA F GFAGSFFA RQG +SPESFTF+ESA+ILA
Sbjct: 294 ALREDEIACRALGMNPTVIKLSAFTLGATFAGFAGSFFAARQGLVSPESFTFIESAIILA 353

Query: 376 IVVLGGMGSQIGVVIAAFFLVVLPEVFREFDQFRMFFFGAAMVAVMVWRPRGLLSYRDP 434
           IVVLGGMGSQ+GV++AA  +++LPE+ REF ++RM  FGA MV +M+WRP+GLL  + P
Sbjct: 354 IVVLGGMGSQLGVILAAIVMILLPELMREFSEYRMLMFGALMVLMMIWRPQGLLPMQRP 412