Pairwise Alignments

Query, 1177 a.a., Transcription-repair coupling factor (NCBI) from Rhodospirillum rubrum S1H

Subject, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (615), Expect = 1e-67
 Identities = 160/455 (35%), Positives = 244/455 (53%), Gaps = 30/455 (6%)

Query: 580  AKLKQRIRDMAEQLIGVAAAR---QLKVGEVISPPEGLYDEFAARFPYAETDDQLRAIAD 636
            A+++  + ++  Q + + A R   Q  V   ++P   L  +  A+ P++ T  Q R +A+
Sbjct: 219  AQIRLIMEELLAQNLSMLAIRSQGQQDVALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAE 278

Query: 637  TLDDLAAGRPMDRLICGDVGFGKTEVALRAAFATAMSGRQVAVVVPTTLLARQHHLTFKE 696
               DLA   PM RL+ GDVG GKT VA  AA      G QVA++ PT LLA QH L F +
Sbjct: 279  IEADLAKPHPMMRLVQGDVGSGKTLVAALAAVRAIEHGYQVALMAPTELLAEQHALNFAQ 338

Query: 697  RFAGLPVRIGQLSRLVTARDTKAVKEEMAAGTLDIVVGTHALLAKTVRFRDLGLLIVDEE 756
                + +++G L+  +  +  +     +A+G + +VVGTHAL  + V F  L L+I+DE+
Sbjct: 339  WLEPMGIQVGWLAGKLKGKARETELARIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQ 398

Query: 757  QHFGVAHKERLKQMRAD----VHVLTLTATPIPRTLQLALTGVREMSIIATPPVDRLAVR 812
              FGV  +  L++  A      H L +TATPIPRTL +      E S+I   P  R  ++
Sbjct: 399  HRFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQ 458

Query: 813  TFVLP---FDPVV--VREAILRERFRGGQCFYVCPRLTDID--------KVMERLTTLVP 859
            T  +P    D +V  +R A L E   G Q ++VC  + + +        +  E L   +P
Sbjct: 459  TVAIPDTKRDEIVERIRHACLNE---GKQAYWVCTLIDESEVLEAQAAAETAEELQRKLP 515

Query: 860  DIRAVVAHGQMAPSRLEEVMTAFADGQYDVLVATNIVESGLDIPRANTIIIHRADMFGLA 919
            +++  + HG+M P+  + VM AF + +  +LVAT ++E G+D+P A+ +II   +  GLA
Sbjct: 516  EVKIGLVHGRMKPAEKQAVMQAFKNNELHLLVATTVIEVGVDVPNASLMIIENPERLGLA 575

Query: 920  QLYQLRGRVGRARARGYAYLTLPPGRTVSKTAAKRLDVMQTLDTLGAGFTLASHDLDIRG 979
            QL+QLRGRVGR     +  L       +SKTA KRL V++  +    GF +A  DL+IRG
Sbjct: 576  QLHQLRGRVGRGTVASHCVLLF--HAPLSKTAQKRLGVLRESND---GFVIAQRDLEIRG 630

Query: 980  AGNLLGDEQSG--HIKEVGIELYQQLLEEAVAAAR 1012
             G LLG +Q+G    K   +   QQL+ +    AR
Sbjct: 631  PGELLGTKQTGLADFKIADLVRDQQLVPQVQRIAR 665