Pairwise Alignments

Query, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 17/250 (6%)

Query: 27  ETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLKSGSLSLDDTFSVSE 86
           E  A  ALVIDL T+ ++   + D   P +S++KLMTA +  +      L +D    ++ 
Sbjct: 44  ELSANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLD----AKLPMDAKLPITI 99

Query: 87  NAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAENLAGDEATFAAAMN 146
               K      G    +  G+++   D++   ++ S N A   +A +  G    F  AMN
Sbjct: 100 ----KDAKEMKGVHSRVKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMN 155

Query: 147 RRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFYEIYGETKFTYN--- 203
            +AK LG+ N+ FV  TGL   ++  TA DLV+L +   + +P   ++    K T     
Sbjct: 156 AKAKALGMKNTRFVEPTGL-SAKNVSTARDLVVLLK-ASKKYPLLGKLSATDKKTVTFSK 213

Query: 204 ---GIVQHNRNPLLYM-NMGADGLKTGHTNIAGFGLTASAVQDGRRLLMVINGLQSNKER 259
               +   N N L++  N   D  KTG TN AG  L        R++  V+   +     
Sbjct: 214 PRYTLDFRNTNRLVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSP 273

Query: 260 SEEAERLMSW 269
             +A RL +W
Sbjct: 274 VGDANRLRTW 283